Variant report

Variant rs28391404
Chromosome Location chr9:617717-617718
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:590000-625000 Weak transcription Aorta Aorta
2 chr9:590200-621600 Weak transcription Psoas Muscle Psoas
3 chr9:606000-628200 Weak transcription H9 Cell Line embryonic stem cell
4 chr9:610400-618200 Enhancers Fetal Heart heart
5 chr9:613200-618400 Enhancers Breast Myoepithelial Primary Cells Breast
6 chr9:613800-619400 Enhancers NHEK skin
7 chr9:614000-618200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr9:614000-618400 Enhancers Left Ventricle heart
9 chr9:614400-630800 Weak transcription A549 lung
10 chr9:614600-621600 Weak transcription Fetal Kidney kidney
11 chr9:614600-625800 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr9:614800-617800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr9:614800-618000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr9:614800-618000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr9:614800-618400 Weak transcription NHLF lung
16 chr9:614800-618800 Weak transcription NH-A brain
17 chr9:614800-618800 Weak transcription NHDF-Ad bronchial
18 chr9:614800-619200 Weak transcription Brain Inferior Temporal Lobe brain
19 chr9:614800-619600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr9:614800-621000 Weak transcription Duodenum Mucosa Duodenum
21 chr9:614800-621400 Weak transcription Adipose Nuclei Adipose
22 chr9:614800-621400 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr9:614800-621600 Weak transcription Fetal Muscle Leg muscle
24 chr9:614800-621600 Weak transcription Gastric stomach
25 chr9:614800-627000 Weak transcription Fetal Intestine Small intestine
26 chr9:614800-631400 Weak transcription Esophagus oesophagus
27 chr9:615200-618400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr9:615200-619200 Weak transcription Brain Cingulate Gyrus brain
29 chr9:615200-625800 Weak transcription Placenta Placenta
30 chr9:615800-618000 Enhancers HSMMtube muscle
31 chr9:616000-621000 Weak transcription HepG2 liver
32 chr9:616200-621200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr9:616600-617800 Enhancers Rectal Mucosa Donor 31 rectum
34 chr9:616600-617800 Enhancers Right Ventricle heart
35 chr9:616600-618000 Enhancers Cortex derived primary cultured neurospheres brain
36 chr9:616600-618000 Enhancers Brain Anterior Caudate brain
37 chr9:616600-618200 Enhancers HSMM muscle
38 chr9:616600-619600 Enhancers Colon Smooth Muscle Colon
39 chr9:616600-620000 Enhancers Muscle Satellite Cultured Cells --
40 chr9:616800-617800 Enhancers Right Atrium heart
41 chr9:616800-618400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr9:616800-619400 Enhancers Rectal Smooth Muscle rectum
43 chr9:616800-619800 Enhancers Placenta Amnion Placenta Amnion
44 chr9:616800-655800 Weak transcription Pancreas Pancrea
45 chr9:617000-618000 Weak transcription Brain Hippocampus Middle brain
46 chr9:617000-621200 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr9:617000-626000 Weak transcription Stomach Mucosa stomach
48 chr9:617000-628000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr9:617000-631000 Weak transcription HMEC breast
50 chr9:617200-617800 Enhancers HUES6 Cell Line embryonic stem cell

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