Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:41497014..41504538-chr21:41754696..41760101,9	MCF-7	breast:
2	chr21:41497051..41498932-chr21:41707550..41711290,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000235123	Chromatin interaction

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11700591	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11701068	0.91[AFR][1000 genomes]
rs11701451	0.88[AFR][1000 genomes]
rs11701674	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11702070	0.86[AFR][1000 genomes]
rs11702319	0.98[EUR][1000 genomes]
rs11702531	0.91[AFR][1000 genomes]
rs13049725	0.91[AFR][1000 genomes]
rs17755603	0.86[AFR][1000 genomes]
rs2410214	0.86[AFR][1000 genomes]
rs2898399	0.86[AFR][1000 genomes]
rs389575	0.96[EUR][1000 genomes]
rs451518	0.96[EUR][1000 genomes]
rs62235659	0.87[AMR][1000 genomes]
rs62237598	0.86[AFR][1000 genomes]
rs62237611	0.86[AFR][1000 genomes]
rs62237612	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62237614	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62237635	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62237637	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9647186	0.91[AFR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:41491800-41510200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr21:41492400-41510400	Weak transcription	Fetal Brain Female	brain
3	chr21:41493000-41510200	Weak transcription	Brain Angular Gyrus	brain
4	chr21:41494200-41511600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr21:41494800-41506000	Weak transcription	Brain Cingulate Gyrus	brain
6	chr21:41497800-41499000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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