Variant report

Variant	rs62237614
Chromosome Location	chr21:41492530-41492531
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11700591	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11701674	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11702319	0.98[EUR][1000 genomes]
rs28412810	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs389575	0.96[EUR][1000 genomes]
rs451518	0.96[EUR][1000 genomes]
rs62235659	0.93[AMR][1000 genomes]
rs62237612	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62237635	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62237637	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:41488600-41493600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr21:41491800-41510200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr21:41492400-41492600	Enhancers	Fetal Stomach	stomach
4	chr21:41492400-41493000	Enhancers	Colon Smooth Muscle	Colon
5	chr21:41492400-41493000	Enhancers	Rectal Smooth Muscle	rectum
6	chr21:41492400-41510400	Weak transcription	Fetal Brain Female	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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