Variant report

Variant	rs451518
Chromosome Location	chr21:41479698-41479699
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11700591	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs11701674	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs11702319	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs2837449	0.82[CHB][hapmap];1.00[JPT][hapmap]
rs2837457	1.00[JPT][hapmap]
rs28412810	0.96[EUR][1000 genomes]
rs385712	0.92[AFR][1000 genomes]
rs389575	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62237612	0.91[EUR][1000 genomes]
rs62237614	0.96[EUR][1000 genomes]
rs62237635	0.96[EUR][1000 genomes]
rs62237637	0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv523501	chr21:41467826-41479698	Enhancers Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:41477200-41482600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr21:41479200-41480800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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