Variant report

Variant rs28418462
Chromosome Location chr9:44227510-44227511
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:44227000-44227600 Active TSS A549 lung
2 chr9:44227200-44227600 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
3 chr9:44227200-44227600 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr9:44227200-44227600 Active TSS H9 Cell Line embryonic stem cell
5 chr9:44227200-44227600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
6 chr9:44227200-44227600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
7 chr9:44227200-44227600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr9:44227200-44227600 Active TSS Breast Myoepithelial Primary Cells Breast
9 chr9:44227200-44227600 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
10 chr9:44227200-44227600 Enhancers Primary T helper cells PMA-I stimulated --
11 chr9:44227200-44227600 Enhancers Primary T regulatory cells fromperipheralblood blood
12 chr9:44227200-44227600 Enhancers Primary Natural Killer cells fromperipheralblood blood
13 chr9:44227200-44227600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr9:44227200-44227600 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr9:44227200-44227600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
16 chr9:44227200-44227600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr9:44227200-44227600 Active TSS Brain Germinal Matrix brain
18 chr9:44227200-44227600 Active TSS Esophagus oesophagus
19 chr9:44227200-44227600 Active TSS Stomach Mucosa stomach
20 chr9:44227200-44227600 Flanking Active TSS Stomach Smooth Muscle stomach
21 chr9:44227200-44227600 Enhancers HMEC breast
22 chr9:44227200-44227800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr9:44227200-44227800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
24 chr9:44227200-44227800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
25 chr9:44227200-44227800 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
26 chr9:44227200-44227800 Active TSS iPS-15b Cell Line embryonic stem cell
27 chr9:44227200-44227800 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
28 chr9:44227200-44227800 Active TSS iPS-20b Cell Line embryonic stem cell
29 chr9:44227200-44227800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr9:44227200-44227800 Enhancers Primary B cells from peripheral blood blood
31 chr9:44227200-44227800 Enhancers Primary T helper 17 cells PMA-I stimulated --
32 chr9:44227200-44227800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
33 chr9:44227200-44227800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr9:44227200-44227800 Flanking Active TSS Adipose Nuclei Adipose
35 chr9:44227200-44227800 Enhancers Liver Liver
36 chr9:44227200-44227800 Active TSS Brain Angular Gyrus brain
37 chr9:44227200-44227800 Active TSS Brain Anterior Caudate brain
38 chr9:44227200-44227800 Active TSS Brain Hippocampus Middle brain
39 chr9:44227200-44227800 Active TSS Brain Inferior Temporal Lobe brain
40 chr9:44227200-44227800 Active TSS Brain Substantia Nigra brain
41 chr9:44227200-44227800 Active TSS Colonic Mucosa Colon
42 chr9:44227200-44227800 Enhancers Fetal Brain Male brain
43 chr9:44227200-44227800 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
44 chr9:44227200-44227800 Enhancers Placenta Placenta
45 chr9:44227200-44227800 Active TSS Left Ventricle heart
46 chr9:44227200-44227800 Active TSS HepG2 liver
47 chr9:44227200-44227800 Active TSS NH-A brain
48 chr9:44227200-44227800 Flanking Active TSS NHEK skin
49 chr9:44227200-44228000 ZNF genes & repeats Fetal Stomach stomach
50 chr9:44227400-44227600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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