Variant report

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs1114382	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11915727	0.87[ASN][1000 genomes]
rs12107605	1.00[EUR][1000 genomes]
rs12107606	1.00[EUR][1000 genomes]
rs12108183	1.00[EUR][1000 genomes]
rs1450304	1.00[EUR][1000 genomes]
rs1450306	1.00[EUR][1000 genomes]
rs1450308	1.00[EUR][1000 genomes]
rs1597451	1.00[EUR][1000 genomes]
rs1597452	1.00[EUR][1000 genomes]
rs17012124	1.00[EUR][1000 genomes]
rs1824016	0.87[ASN][1000 genomes]
rs1828675	0.84[ASN][1000 genomes]
rs2122471	1.00[EUR][1000 genomes]
rs2122472	1.00[EUR][1000 genomes]
rs28566527	0.87[ASN][1000 genomes]
rs28650867	0.87[ASN][1000 genomes]
rs28864513	1.00[EUR][1000 genomes]
rs28875337	1.00[EUR][1000 genomes]
rs3907059	0.87[ASN][1000 genomes]
rs4470547	1.00[EUR][1000 genomes]
rs4858053	1.00[EUR][1000 genomes]
rs4858453	1.00[EUR][1000 genomes]
rs4858454	1.00[EUR][1000 genomes]
rs4858456	1.00[EUR][1000 genomes]
rs4858459	1.00[EUR][1000 genomes]
rs4858460	1.00[EUR][1000 genomes]
rs4858461	1.00[EUR][1000 genomes]
rs4858465	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4858466	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58741876	0.87[ASN][1000 genomes]
rs73822912	0.87[ASN][1000 genomes]
rs73822913	0.87[ASN][1000 genomes]
rs73822914	0.87[ASN][1000 genomes]
rs7624850	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7652748	1.00[EUR][1000 genomes]
rs9812923	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014828	chr3:22554271-23033498	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1008306	chr3:22762892-23026548	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:22969200-22971000	Enhancers	Fetal Stomach	stomach
2	chr3:22969400-22971200	Enhancers	Fetal Heart	heart
3	chr3:22969600-22970400	Enhancers	Colon Smooth Muscle	Colon
4	chr3:22969800-22970400	Enhancers	Fetal Lung	lung
5	chr3:22969800-22970400	Enhancers	Placenta Amnion	Placenta Amnion
6	chr3:22969800-22970600	Enhancers	Fetal Muscle Leg	muscle
7	chr3:22969800-22971000	Enhancers	Skeletal Muscle Female	skeletal muscle
8	chr3:22969800-22971000	Enhancers	Stomach Smooth Muscle	stomach
9	chr3:22969800-22971200	Enhancers	Ovary	ovary
10	chr3:22970200-22970800	Enhancers	Brain Germinal Matrix	brain
11	chr3:22970200-22976600	Weak transcription	Rectal Smooth Muscle	rectum

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