Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10090981	0.81[EUR][1000 genomes]
rs12544929	0.84[EUR][1000 genomes]
rs12545436	0.84[EUR][1000 genomes]
rs13253882	0.91[EUR][1000 genomes]
rs13264197	0.81[EUR][1000 genomes]
rs13267650	0.93[EUR][1000 genomes]
rs1460242	0.93[EUR][1000 genomes]
rs1551722	0.84[EUR][1000 genomes]
rs2199261	0.93[EUR][1000 genomes]
rs2290865	0.81[EUR][1000 genomes]
rs2685532	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4392867	0.84[EUR][1000 genomes]
rs4734114	0.83[EUR][1000 genomes]
rs4734826	0.90[EUR][1000 genomes]
rs4734827	0.81[EUR][1000 genomes]
rs4734829	0.82[EUR][1000 genomes]
rs4734830	0.84[EUR][1000 genomes]
rs4734831	0.84[EUR][1000 genomes]
rs4734832	0.84[EUR][1000 genomes]
rs6468970	0.90[EUR][1000 genomes]
rs6468976	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026754	chr8:105382508-106030916	Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
2	nsv539709	chr8:105382508-106030916	Enhancers Weak transcription Genic enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
3	nsv1032476	chr8:105609904-106030916	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	nsv539710	chr8:105609904-106030916	Enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:105935000-105936800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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