Variant report

Variant	rs28464714
Chromosome Location	chr4:78057517-78057518
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11097704	0.89[ASN][1000 genomes]
rs11731592	0.82[ASN][1000 genomes]
rs4241604	0.87[ASN][1000 genomes]
rs4365751	0.87[ASN][1000 genomes]
rs4382065	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4518274	0.89[ASN][1000 genomes]
rs4558892	0.96[ASN][1000 genomes]
rs4859473	0.89[ASN][1000 genomes]
rs6532867	0.82[ASN][1000 genomes]
rs6532868	0.82[ASN][1000 genomes]
rs6532870	0.82[ASN][1000 genomes]
rs6532871	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879500	chr4:78045960-78115334	Genic enhancers Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:78057200-78057600	Enhancers	Fetal Intestine Small	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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