Variant report

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs12108371	1.00[ASN][1000 genomes]
rs13108598	0.88[EUR][1000 genomes]
rs13122713	0.81[EUR][1000 genomes]
rs13122964	0.81[EUR][1000 genomes]
rs1473392	0.84[EUR][1000 genomes]
rs1473393	0.84[EUR][1000 genomes]
rs17319860	1.00[ASN][1000 genomes]
rs1976456	0.86[EUR][1000 genomes]
rs2088981	0.94[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs2088982	0.87[EUR][1000 genomes]
rs2088983	0.93[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs2348620	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4260490	0.87[EUR][1000 genomes]
rs4280695	0.87[EUR][1000 genomes]
rs4422371	0.87[EUR][1000 genomes]
rs4558823	0.87[EUR][1000 genomes]
rs61217796	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62338529	0.82[EUR][1000 genomes]
rs6536465	0.84[EUR][1000 genomes]
rs6536467	0.81[EUR][1000 genomes]
rs7656318	0.88[EUR][1000 genomes]
rs7656981	0.88[EUR][1000 genomes]
rs7670573	0.82[EUR][1000 genomes]
rs7671117	0.82[EUR][1000 genomes]
rs7672324	0.88[EUR][1000 genomes]
rs7672522	0.88[EUR][1000 genomes]
rs7672862	0.88[EUR][1000 genomes]
rs7679504	0.88[EUR][1000 genomes]
rs7690659	0.87[EUR][1000 genomes]
rs868962	0.93[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs9992728	0.88[EUR][1000 genomes]
rs9992918	0.88[EUR][1000 genomes]
rs9993406	0.81[EUR][1000 genomes]
rs9993480	0.88[EUR][1000 genomes]
rs9996294	0.87[EUR][1000 genomes]
rs9996302	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015469	chr4:160389277-160841619	Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv537316	chr4:160389277-160841619	Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv595813	chr4:160574450-160665365	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv968019	chr4:160646974-160653132	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:160644800-160648000	Weak transcription	Pancreas	Pancrea

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