The 2.0 version of rSNPBase

Variant report

Variant rs28527215
Chromosome Location chr17:38199281-38199282
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:38186600-38209800 Weak transcription Small Intestine intestine
2 chr17:38188800-38209400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr17:38189600-38206600 Weak transcription H9 Cell Line embryonic stem cell
4 chr17:38189600-38209600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr17:38189600-38209600 Weak transcription Psoas Muscle Psoas
6 chr17:38190600-38209600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr17:38191000-38208800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr17:38191400-38201000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr17:38191800-38206000 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr17:38192000-38209600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr17:38192200-38206600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr17:38192200-38209400 Weak transcription Fetal Brain Male brain
13 chr17:38192200-38209600 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr17:38192400-38209600 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr17:38192400-38209600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr17:38192400-38209600 Weak transcription Colonic Mucosa Colon
17 chr17:38192400-38209800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr17:38192400-38210000 Weak transcription Placenta Amnion Placenta Amnion
19 chr17:38192600-38201400 Weak transcription Lung lung
20 chr17:38192600-38201800 Weak transcription Fetal Brain Female brain
21 chr17:38192600-38203200 Weak transcription Primary neutrophils fromperipheralblood blood
22 chr17:38192600-38205600 Weak transcription Spleen Spleen
23 chr17:38192600-38206600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr17:38192600-38206600 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr17:38192600-38208600 Weak transcription NHEK skin
26 chr17:38192600-38209400 Weak transcription Primary hematopoietic stem cells blood
27 chr17:38192600-38209800 Weak transcription Aorta Aorta
28 chr17:38193200-38199400 Weak transcription Primary T cells fromperipheralblood blood
29 chr17:38193200-38199400 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr17:38193200-38203200 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr17:38193200-38203200 Weak transcription Dnd41 blood
32 chr17:38193600-38208600 Weak transcription K562 blood
33 chr17:38193800-38206600 Weak transcription Esophagus oesophagus
34 chr17:38195400-38203200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr17:38195400-38206400 Weak transcription Ovary ovary
36 chr17:38195400-38209600 Weak transcription Pancreas Pancrea
37 chr17:38195600-38199600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr17:38195600-38204400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr17:38195600-38206400 Weak transcription Brain Inferior Temporal Lobe brain
40 chr17:38195600-38206600 Weak transcription Brain Cingulate Gyrus brain
41 chr17:38195600-38206600 Weak transcription Brain Substantia Nigra brain
42 chr17:38195600-38206600 Weak transcription A549 lung
43 chr17:38195600-38206600 Weak transcription HMEC breast
44 chr17:38195600-38208000 Weak transcription Fetal Kidney kidney
45 chr17:38195600-38208600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
46 chr17:38195600-38209400 Weak transcription Hela-S3 cervix
47 chr17:38195800-38199400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr17:38195800-38199400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr17:38195800-38199400 Weak transcription Duodenum Mucosa Duodenum
50 chr17:38195800-38201000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015