The 2.0 version of rSNPBase

Variant report

Variant rs28536756
Chromosome Location chr3:179442743-179442744
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:179384800-179443800 Weak transcription Esophagus oesophagus
2 chr3:179385000-179448400 Weak transcription Fetal Brain Male brain
3 chr3:179391000-179444000 Weak transcription Pancreas Pancrea
4 chr3:179391000-179452200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr3:179399000-179459800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr3:179406200-179503000 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr3:179406600-179449400 Weak transcription Spleen Spleen
8 chr3:179416200-179448400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr3:179419600-179444000 Weak transcription Monocytes-CD14+_RO01746 blood
10 chr3:179420200-179478800 Weak transcription Rectal Smooth Muscle rectum
11 chr3:179422800-179460600 Weak transcription Duodenum Mucosa Duodenum
12 chr3:179423400-179448200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr3:179423400-179448400 Weak transcription Gastric stomach
14 chr3:179424000-179474800 Weak transcription Fetal Kidney kidney
15 chr3:179424400-179487600 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr3:179425200-179448400 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr3:179425600-179443800 Weak transcription Aorta Aorta
18 chr3:179425600-179446600 Weak transcription Fetal Intestine Large intestine
19 chr3:179425800-179447000 Weak transcription Placenta Placenta
20 chr3:179427000-179457600 Weak transcription Thymus Thymus
21 chr3:179427400-179449200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr3:179428800-179447600 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr3:179428800-179452200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr3:179428800-179456800 Weak transcription HUVEC blood vessel
25 chr3:179428800-179460000 Weak transcription Brain Substantia Nigra brain
26 chr3:179429000-179447600 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr3:179429000-179466200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr3:179432400-179447800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr3:179432800-179443800 Weak transcription Psoas Muscle Psoas
30 chr3:179434400-179449200 Weak transcription Fetal Heart heart
31 chr3:179434400-179450600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr3:179434600-179452200 Weak transcription A549 lung
33 chr3:179435000-179447800 Weak transcription Primary hematopoietic stem cells blood
34 chr3:179435200-179449200 Weak transcription Muscle Satellite Cultured Cells --
35 chr3:179435400-179450600 Weak transcription HSMMtube muscle
36 chr3:179435600-179460000 Weak transcription NHDF-Ad bronchial
37 chr3:179436000-179459800 Weak transcription Small Intestine intestine
38 chr3:179436200-179447600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr3:179436200-179448200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr3:179436400-179448400 Weak transcription NHLF lung
41 chr3:179436800-179445000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr3:179437400-179443400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr3:179437400-179490200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr3:179437400-179501800 Weak transcription Pancreatic Islets Pancreatic Islet
45 chr3:179437800-179447800 Weak transcription H9 Cell Line embryonic stem cell
46 chr3:179438000-179448000 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr3:179438200-179452200 Weak transcription ES-WA7 Cell Line embryonic stem cell
48 chr3:179438400-179444000 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr3:179438400-179489200 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr3:179439200-179444800 Strong transcription Fetal Stomach stomach

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Last update: Aug 31, 2015