The 2.0 version of rSNPBase

Variant report

Variant rs28539444
Chromosome Location chr14:105848417-105848418
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:105797000-105849200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr14:105808600-105848600 Weak transcription HSMMtube muscle
3 chr14:105814200-105848600 Weak transcription Left Ventricle heart
4 chr14:105818800-105849200 Weak transcription A549 lung
5 chr14:105822000-105848800 Weak transcription H9 Cell Line embryonic stem cell
6 chr14:105823600-105863400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr14:105823800-105849600 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr14:105831000-105863800 Weak transcription Fetal Kidney kidney
9 chr14:105831400-105848800 Weak transcription Muscle Satellite Cultured Cells --
10 chr14:105831400-105864000 Weak transcription Osteobl bone
11 chr14:105831600-105850600 Weak transcription Fetal Heart heart
12 chr14:105831600-105855200 Strong transcription Fetal Stomach stomach
13 chr14:105831600-105863200 Weak transcription NHDF-Ad bronchial
14 chr14:105832200-105849600 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr14:105835200-105848600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr14:105835200-105848600 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr14:105835200-105849200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr14:105835200-105849400 Weak transcription Rectal Smooth Muscle rectum
19 chr14:105835400-105848800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr14:105836000-105850000 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr14:105836400-105849000 Weak transcription Placenta Amnion Placenta Amnion
22 chr14:105836600-105849000 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr14:105837800-105855200 Weak transcription HSMM muscle
24 chr14:105838200-105849200 Weak transcription Fetal Lung lung
25 chr14:105838400-105849200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr14:105842200-105852600 Weak transcription NHEK skin
27 chr14:105842600-105848800 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr14:105842600-105849600 Weak transcription NH-A brain
29 chr14:105842600-105856000 Weak transcription Primary B cells from peripheral blood blood
30 chr14:105842800-105851200 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr14:105842800-105854600 Weak transcription Primary B cells from cord blood blood
32 chr14:105842800-105855200 Weak transcription Primary hematopoietic stem cells blood
33 chr14:105842800-105855800 Weak transcription Primary neutrophils fromperipheralblood blood
34 chr14:105842800-105856400 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr14:105842800-105856400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr14:105843200-105849200 Weak transcription Primary T cells fromperipheralblood blood
37 chr14:105843200-105854200 Strong transcription Brain Hippocampus Middle brain
38 chr14:105843600-105850200 Strong transcription Fetal Muscle Trunk muscle
39 chr14:105844000-105855200 Strong transcription Brain Cingulate Gyrus brain
40 chr14:105844400-105854400 Strong transcription Stomach Smooth Muscle stomach
41 chr14:105844400-105856200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr14:105844400-105862400 Strong transcription Brain Germinal Matrix brain
43 chr14:105844400-105862800 Strong transcription Fetal Intestine Small intestine
44 chr14:105844600-105849800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr14:105844600-105850400 Strong transcription Fetal Muscle Leg muscle
46 chr14:105844600-105854200 Strong transcription Primary hematopoietic stem cells short term culture blood
47 chr14:105844800-105849000 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr14:105844800-105857000 Weak transcription Stomach Mucosa stomach
49 chr14:105845000-105852000 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr14:105845000-105854200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015