Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	EGR1	chr7:99195472-99195992	K562	blood:	n/a	n/a
2	ZNF274	chr7:99195043-99195566	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:99193891..99196715-chr7:99214150..99216733,2	K562	blood:

Variant related genes	Relation type
ENSG00000244219	TF binding region
ENSG00000197037	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10085823	0.86[EUR][1000 genomes]
rs10231948	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs10239443	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10249659	0.86[EUR][1000 genomes]
rs10264303	0.86[EUR][1000 genomes]
rs10271695	0.86[EUR][1000 genomes]
rs10277362	0.86[EUR][1000 genomes]
rs12386578	0.86[EUR][1000 genomes]
rs13438585	0.86[EUR][1000 genomes]
rs28374840	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs28378107	0.86[EUR][1000 genomes]
rs28497153	0.86[EUR][1000 genomes]
rs3197990	0.86[EUR][1000 genomes]
rs45529834	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs45558438	0.86[EUR][1000 genomes]
rs45599236	0.86[EUR][1000 genomes]
rs45610838	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs60996680	0.86[EUR][1000 genomes]
rs61435529	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs940334	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2554756	chr7:99182537-99196388	Enhancers Bivalent/Poised TSS Weak transcription Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv3406454	chr7:99191016-99195714	Active TSS Genic enhancers Enhancers Weak transcription	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:99194200-99197600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr7:99194800-99195600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr7:99195200-99195600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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