Variant report

Variant	rs28571606
Chromosome Location	chr8:110816581-110816582
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10086058	1.00[EUR][1000 genomes]
rs10091536	1.00[EUR][1000 genomes]
rs10097751	1.00[EUR][1000 genomes]
rs10101288	1.00[EUR][1000 genomes]
rs11995397	0.89[ASN][1000 genomes]
rs16879889	1.00[EUR][1000 genomes]
rs16879906	1.00[EUR][1000 genomes]
rs28423669	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28583803	1.00[EUR][1000 genomes]
rs28593097	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28610171	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28623195	1.00[EUR][1000 genomes]
rs4313130	1.00[EUR][1000 genomes]
rs57167766	1.00[EUR][1000 genomes]
rs57285880	1.00[EUR][1000 genomes]
rs57962861	1.00[EUR][1000 genomes]
rs58404081	1.00[EUR][1000 genomes]
rs58910462	1.00[EUR][1000 genomes]
rs59161508	1.00[EUR][1000 genomes]
rs59981669	1.00[EUR][1000 genomes]
rs60387056	1.00[EUR][1000 genomes]
rs60841208	1.00[EUR][1000 genomes]
rs73319188	1.00[EUR][1000 genomes]
rs73319190	1.00[EUR][1000 genomes]
rs7817773	1.00[EUR][1000 genomes]
rs7825511	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7825600	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7825601	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7841490	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv611880	chr8:110762913-110821596	Enhancers Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110815400-110816600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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