Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:106075494..106077166-chr8:106081357..106083896,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs176236	0.81[AMR][1000 genomes]
rs285782	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs285795	0.81[AMR][1000 genomes]
rs285796	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs285798	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs285814	0.81[AMR][1000 genomes]
rs285816	0.81[AMR][1000 genomes]
rs285819	0.92[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.87[YRI][hapmap]
rs285820	0.93[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.88[YRI][hapmap];0.81[AMR][1000 genomes]
rs285824	0.96[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap]
rs285825	0.81[AMR][1000 genomes]
rs285826	0.82[AMR][1000 genomes]
rs285827	0.82[AMR][1000 genomes]
rs285828	0.82[AFR][1000 genomes]
rs285829	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs285833	0.82[AMR][1000 genomes]
rs285834	0.82[AMR][1000 genomes]
rs285840	0.89[CEU][hapmap];0.80[YRI][hapmap]
rs285842	0.89[CEU][hapmap];0.81[ASN][1000 genomes]
rs285843	0.88[CEU][hapmap];0.82[ASN][1000 genomes]
rs285845	0.88[CEU][hapmap];0.83[ASN][1000 genomes]
rs285848	0.80[ASN][1000 genomes]
rs285871	0.81[ASN][1000 genomes]
rs285872	0.82[ASN][1000 genomes]
rs285873	0.81[ASN][1000 genomes]
rs2926696	0.82[AFR][1000 genomes]
rs627350	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762763	chr8:105943295-106218634	Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv891253	chr8:105994885-106251476	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv891254	chr8:106060970-106175867	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:106081200-106083200	Enhancers	NH-A	brain
2	chr8:106081600-106083000	Enhancers	Muscle Satellite Cultured Cells	--
3	chr8:106081600-106083000	Enhancers	NHDF-Ad	bronchial
4	chr8:106081800-106082600	Enhancers	NHEK	skin
5	chr8:106081800-106083200	Enhancers	Hela-S3	cervix
6	chr8:106081800-106083200	Enhancers	HUVEC	blood vessel
7	chr8:106081800-106083400	Enhancers	HSMM	muscle
8	chr8:106081800-106084000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr8:106082000-106082800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr8:106082200-106082600	Enhancers	Fetal Heart	heart
11	chr8:106082200-106084000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr8:106082200-106086200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr8:106082400-106085600	Weak transcription	HUES48 Cell Line	embryonic stem cell

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