The 2.0 version of rSNPBase

Variant report

Variant rs28583318
Chromosome Location chr1:75213044-75213045
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:75200000-75231600 Weak transcription Primary neutrophils fromperipheralblood blood
2 chr1:75200200-75217600 Weak transcription Stomach Mucosa stomach
3 chr1:75200400-75218400 Weak transcription Fetal Heart heart
4 chr1:75201400-75231800 Strong transcription Dnd41 blood
5 chr1:75202400-75219000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr1:75202400-75224000 Strong transcription Primary T cells fromperipheralblood blood
7 chr1:75202400-75226400 Strong transcription Fetal Intestine Large intestine
8 chr1:75202400-75231200 Strong transcription Breast Myoepithelial Primary Cells Breast
9 chr1:75202400-75231200 Strong transcription Adipose Nuclei Adipose
10 chr1:75202400-75231200 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr1:75202400-75231400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
12 chr1:75202800-75222800 Strong transcription Duodenum Smooth Muscle Duodenum
13 chr1:75202800-75225600 Strong transcription Fetal Muscle Trunk muscle
14 chr1:75204000-75218400 Weak transcription H9 Cell Line embryonic stem cell
15 chr1:75204000-75221400 Weak transcription Fetal Brain Male brain
16 chr1:75204000-75221800 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr1:75204000-75231400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:75204000-75231400 Weak transcription Psoas Muscle Psoas
19 chr1:75204400-75217000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr1:75205000-75213200 Strong transcription Left Ventricle heart
21 chr1:75205200-75232400 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr1:75205600-75221200 Strong transcription Fetal Muscle Leg muscle
23 chr1:75205800-75214200 Weak transcription HMEC breast
24 chr1:75205800-75214600 Weak transcription NHDF-Ad bronchial
25 chr1:75206000-75216800 Weak transcription Fetal Kidney kidney
26 chr1:75206000-75220400 Weak transcription NHEK skin
27 chr1:75206200-75214600 Weak transcription Hela-S3 cervix
28 chr1:75206200-75218000 Weak transcription Brain Germinal Matrix brain
29 chr1:75206200-75220400 Weak transcription HSMMtube muscle
30 chr1:75206200-75232400 Weak transcription Small Intestine intestine
31 chr1:75206200-75232800 Weak transcription NHLF lung
32 chr1:75206400-75218400 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr1:75206400-75219000 Weak transcription A549 lung
34 chr1:75206400-75221600 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr1:75206600-75216800 Weak transcription NH-A brain
36 chr1:75206600-75218600 Weak transcription Osteobl bone
37 chr1:75206800-75230600 Weak transcription Pancreas Pancrea
38 chr1:75206800-75233600 Weak transcription Gastric stomach
39 chr1:75207000-75214600 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr1:75207600-75222000 Strong transcription Primary T helper cells PMA-I stimulated --
41 chr1:75207600-75233400 Weak transcription Brain Cingulate Gyrus brain
42 chr1:75207800-75214600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr1:75207800-75221200 Weak transcription Placenta Amnion Placenta Amnion
44 chr1:75208000-75218200 Weak transcription K562 blood
45 chr1:75208200-75220000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr1:75209200-75214600 Weak transcription Colon Smooth Muscle Colon
47 chr1:75209400-75215400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:75209400-75228600 Strong transcription Primary T helper cells fromperipheralblood blood
49 chr1:75210600-75213800 Weak transcription Fetal Thymus thymus
50 chr1:75210600-75214200 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015