The 2.0 version of rSNPBase

Variant report

Variant rs4145871
Chromosome Location chr1:75218704-75218705
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:75200000-75231600 Weak transcription Primary neutrophils fromperipheralblood blood
2 chr1:75201400-75231800 Strong transcription Dnd41 blood
3 chr1:75202400-75219000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:75202400-75224000 Strong transcription Primary T cells fromperipheralblood blood
5 chr1:75202400-75226400 Strong transcription Fetal Intestine Large intestine
6 chr1:75202400-75231200 Strong transcription Breast Myoepithelial Primary Cells Breast
7 chr1:75202400-75231200 Strong transcription Adipose Nuclei Adipose
8 chr1:75202400-75231200 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr1:75202400-75231400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
10 chr1:75202800-75222800 Strong transcription Duodenum Smooth Muscle Duodenum
11 chr1:75202800-75225600 Strong transcription Fetal Muscle Trunk muscle
12 chr1:75204000-75221400 Weak transcription Fetal Brain Male brain
13 chr1:75204000-75221800 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr1:75204000-75231400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:75204000-75231400 Weak transcription Psoas Muscle Psoas
16 chr1:75205200-75232400 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr1:75205600-75221200 Strong transcription Fetal Muscle Leg muscle
18 chr1:75206000-75220400 Weak transcription NHEK skin
19 chr1:75206200-75220400 Weak transcription HSMMtube muscle
20 chr1:75206200-75232400 Weak transcription Small Intestine intestine
21 chr1:75206200-75232800 Weak transcription NHLF lung
22 chr1:75206400-75219000 Weak transcription A549 lung
23 chr1:75206400-75221600 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr1:75206800-75230600 Weak transcription Pancreas Pancrea
25 chr1:75206800-75233600 Weak transcription Gastric stomach
26 chr1:75207600-75222000 Strong transcription Primary T helper cells PMA-I stimulated --
27 chr1:75207600-75233400 Weak transcription Brain Cingulate Gyrus brain
28 chr1:75207800-75221200 Weak transcription Placenta Amnion Placenta Amnion
29 chr1:75208200-75220000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr1:75209400-75228600 Strong transcription Primary T helper cells fromperipheralblood blood
31 chr1:75210600-75229000 Weak transcription Brain Angular Gyrus brain
32 chr1:75210800-75219400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:75210800-75220600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr1:75210800-75220600 Weak transcription Brain Hippocampus Middle brain
35 chr1:75211000-75220400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:75211000-75221600 Strong transcription Primary hematopoietic stem cells short term culture blood
37 chr1:75211000-75222400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr1:75211000-75222600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr1:75211000-75232000 Weak transcription Colonic Mucosa Colon
40 chr1:75211200-75222400 Weak transcription Esophagus oesophagus
41 chr1:75211600-75218800 Weak transcription Muscle Satellite Cultured Cells --
42 chr1:75211600-75221200 Weak transcription H1 Cell Line embryonic stem cell
43 chr1:75211600-75222400 Strong transcription Primary monocytes fromperipheralblood blood
44 chr1:75211600-75222400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr1:75212000-75221200 Weak transcription ES-I3 Cell Line embryonic stem cell
46 chr1:75213400-75227600 Strong transcription Primary T regulatory cells fromperipheralblood blood
47 chr1:75213600-75222000 Strong transcription Skeletal Muscle Female skeletal muscle
48 chr1:75213800-75222000 Strong transcription Fetal Thymus thymus
49 chr1:75214200-75219200 Strong transcription Brain Anterior Caudate brain
50 chr1:75214200-75222800 Strong transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015