The 2.0 version of rSNPBase

Variant report

Variant rs28589825
Chromosome Location chr14:105823772-105823773
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:105797000-105849200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr14:105799800-105830800 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr14:105804600-105829800 Weak transcription Monocytes-CD14+_RO01746 blood
4 chr14:105807400-105830800 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr14:105807400-105833600 Weak transcription Aorta Aorta
6 chr14:105808600-105848600 Weak transcription HSMMtube muscle
7 chr14:105809800-105830200 Weak transcription Rectal Smooth Muscle rectum
8 chr14:105809800-105830400 Weak transcription Fetal Lung lung
9 chr14:105810000-105833800 Weak transcription Colon Smooth Muscle Colon
10 chr14:105812600-105829600 Weak transcription Primary monocytes fromperipheralblood blood
11 chr14:105813400-105828000 Strong transcription Fetal Intestine Small intestine
12 chr14:105813800-105828400 Strong transcription Fetal Stomach stomach
13 chr14:105814200-105848600 Weak transcription Left Ventricle heart
14 chr14:105816400-105831000 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr14:105818200-105826800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr14:105818600-105827000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr14:105818600-105830200 Weak transcription Osteobl bone
18 chr14:105818600-105830400 Weak transcription Fetal Thymus thymus
19 chr14:105818600-105830800 Weak transcription Primary hematopoietic stem cells blood
20 chr14:105818600-105846000 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr14:105818800-105823800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr14:105818800-105825600 Strong transcription Fetal Muscle Trunk muscle
23 chr14:105818800-105829200 Weak transcription HUVEC blood vessel
24 chr14:105818800-105830200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr14:105818800-105830400 Weak transcription K562 blood
26 chr14:105818800-105830800 Weak transcription Primary B cells from cord blood blood
27 chr14:105818800-105831000 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr14:105818800-105831000 Weak transcription Fetal Heart heart
29 chr14:105818800-105831000 Weak transcription Stomach Mucosa stomach
30 chr14:105818800-105831000 Weak transcription NHEK skin
31 chr14:105818800-105833600 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr14:105818800-105849200 Weak transcription A549 lung
33 chr14:105819000-105825600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr14:105819400-105830200 Weak transcription Primary B cells from peripheral blood blood
35 chr14:105819600-105825600 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr14:105819600-105825600 Strong transcription Skeletal Muscle Male skeletal muscle
37 chr14:105819600-105827000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr14:105819600-105827400 Strong transcription Lung lung
39 chr14:105820000-105825600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr14:105820000-105825600 Strong transcription Cortex derived primary cultured neurospheres brain
41 chr14:105820000-105825600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr14:105820000-105825600 Strong transcription Fetal Muscle Leg muscle
43 chr14:105820000-105828000 Strong transcription Stomach Smooth Muscle stomach
44 chr14:105820000-105831000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr14:105820200-105825400 Strong transcription Primary hematopoietic stem cells short term culture blood
46 chr14:105820200-105827800 Strong transcription Fetal Adrenal Gland Adrenal Gland
47 chr14:105820400-105825400 Strong transcription Right Ventricle heart
48 chr14:105820600-105825800 Strong transcription Skeletal Muscle Female skeletal muscle
49 chr14:105820600-105831000 Weak transcription Small Intestine intestine
50 chr14:105820800-105825600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015