Variant report

Variant	rs73359066
Chromosome Location	chr14:105822377-105822378
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:105815824..105818513-chr14:105821483..105824307,2	K562	blood:

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11847153	0.83[AMR][1000 genomes]
rs11847295	1.00[AMR][1000 genomes]
rs12101178	0.83[AMR][1000 genomes]
rs28589825	1.00[AMR][1000 genomes]
rs60719574	1.00[AMR][1000 genomes]
rs73357398	1.00[AMR][1000 genomes]
rs73359013	1.00[AMR][1000 genomes]
rs73359058	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73359059	1.00[AMR][1000 genomes]
rs73359061	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73359072	1.00[AMR][1000 genomes]
rs8021520	1.00[AMR][1000 genomes]
rs8021663	1.00[AMR][1000 genomes]
rs9671890	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530813	chr14:105607701-106453697	Strong transcription Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	149 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:106 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:105797000-105849200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr14:105799800-105830800	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr14:105804600-105829800	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr14:105807400-105830800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
5	chr14:105807400-105833600	Weak transcription	Aorta	Aorta
6	chr14:105808600-105848600	Weak transcription	HSMMtube	muscle
7	chr14:105809800-105830200	Weak transcription	Rectal Smooth Muscle	rectum
8	chr14:105809800-105830400	Weak transcription	Fetal Lung	lung
9	chr14:105810000-105833800	Weak transcription	Colon Smooth Muscle	Colon
10	chr14:105812600-105829600	Weak transcription	Primary monocytes fromperipheralblood	blood
11	chr14:105813400-105828000	Strong transcription	Fetal Intestine Small	intestine
12	chr14:105813800-105828400	Strong transcription	Fetal Stomach	stomach
13	chr14:105814200-105823200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
14	chr14:105814200-105848600	Weak transcription	Left Ventricle	heart
15	chr14:105816400-105831000	Weak transcription	Primary T helper cells fromperipheralblood	blood
16	chr14:105818200-105826800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr14:105818400-105822800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr14:105818600-105823400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
19	chr14:105818600-105827000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr14:105818600-105830200	Weak transcription	Osteobl	bone
21	chr14:105818600-105830400	Weak transcription	Fetal Thymus	thymus
22	chr14:105818600-105830800	Weak transcription	Primary hematopoietic stem cells	blood
23	chr14:105818600-105846000	Weak transcription	HUES6 Cell Line	embryonic stem cell
24	chr14:105818800-105823200	Weak transcription	HepG2	liver
25	chr14:105818800-105823800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr14:105818800-105825600	Strong transcription	Fetal Muscle Trunk	muscle
27	chr14:105818800-105829200	Weak transcription	HUVEC	blood vessel
28	chr14:105818800-105830200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
29	chr14:105818800-105830400	Weak transcription	K562	blood
30	chr14:105818800-105830800	Weak transcription	Primary B cells from cord blood	blood
31	chr14:105818800-105831000	Weak transcription	Primary T helper cells PMA-I stimulated	--
32	chr14:105818800-105831000	Weak transcription	Fetal Heart	heart
33	chr14:105818800-105831000	Weak transcription	Stomach Mucosa	stomach
34	chr14:105818800-105831000	Weak transcription	NHEK	skin
35	chr14:105818800-105833600	Weak transcription	Duodenum Smooth Muscle	Duodenum
36	chr14:105818800-105849200	Weak transcription	A549	lung
37	chr14:105819000-105825600	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr14:105819400-105830200	Weak transcription	Primary B cells from peripheral blood	blood
39	chr14:105819600-105825600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
40	chr14:105819600-105825600	Strong transcription	Skeletal Muscle Male	skeletal muscle
41	chr14:105819600-105827000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr14:105819600-105827400	Strong transcription	Lung	lung
43	chr14:105820000-105825600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
44	chr14:105820000-105825600	Strong transcription	Cortex derived primary cultured neurospheres	brain
45	chr14:105820000-105825600	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
46	chr14:105820000-105825600	Strong transcription	Fetal Muscle Leg	muscle
47	chr14:105820000-105828000	Strong transcription	Stomach Smooth Muscle	stomach
48	chr14:105820000-105831000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
49	chr14:105820200-105822800	Weak transcription	HUES64 Cell Line	embryonic stem cell
50	chr14:105820200-105823400	Strong transcription	Adipose Nuclei	Adipose

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