Variant report

Variant rs28606499
Chromosome Location chr9:140331548-140331549
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140318600-140335800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr9:140318800-140335600 Weak transcription Right Atrium heart
3 chr9:140325200-140335600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr9:140329000-140331800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
5 chr9:140329400-140332200 Enhancers Pancreas Pancrea
6 chr9:140329400-140332800 Enhancers Spleen Spleen
7 chr9:140329600-140332400 Enhancers Sigmoid Colon Sigmoid Colon
8 chr9:140329600-140332600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr9:140329800-140331800 Enhancers Rectal Mucosa Donor 29 rectum
10 chr9:140329800-140333200 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr9:140330000-140332000 Enhancers A549 lung
12 chr9:140330000-140332800 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
13 chr9:140330200-140335800 Weak transcription Primary hematopoietic stem cells blood
14 chr9:140330400-140332600 Enhancers Esophagus oesophagus
15 chr9:140330600-140331600 Active TSS Rectal Smooth Muscle rectum
16 chr9:140330600-140335800 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr9:140330600-140335800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr9:140330800-140331800 Flanking Active TSS Stomach Mucosa stomach
19 chr9:140330800-140332800 Flanking Active TSS Rectal Mucosa Donor 31 rectum
20 chr9:140330800-140335600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr9:140330800-140335800 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr9:140331000-140331600 Enhancers Fetal Intestine Small intestine
23 chr9:140331000-140332600 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
24 chr9:140331000-140335800 Weak transcription HSMM muscle
25 chr9:140331200-140331600 Bivalent Enhancer HepG2 liver
26 chr9:140331200-140332200 Enhancers Duodenum Mucosa Duodenum
27 chr9:140331200-140332200 Weak transcription HMEC breast
28 chr9:140331200-140335800 Weak transcription Lung lung
29 chr9:140331200-140335800 Weak transcription Ovary ovary
30 chr9:140331400-140331600 Active TSS Hela-S3 cervix
31 chr9:140331400-140332200 Enhancers Colonic Mucosa Colon
32 chr9:140331400-140332600 Enhancers Gastric stomach

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