The 2.0 version of rSNPBase

Variant report

Variant rs28651471
Chromosome Location chr4:174177653-174177654
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:174159200-174204600 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr4:174159600-174189000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr4:174163800-174184600 Weak transcription Primary T helper cells fromperipheralblood blood
4 chr4:174164000-174185600 Weak transcription Primary T cells fromperipheralblood blood
5 chr4:174164000-174185800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr4:174164000-174186000 Weak transcription Aorta Aorta
7 chr4:174164200-174185400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr4:174164800-174178800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr4:174165600-174182200 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr4:174168200-174179000 Genic enhancers Dnd41 blood
11 chr4:174168600-174185800 Weak transcription Brain Germinal Matrix brain
12 chr4:174169400-174185400 Weak transcription Fetal Intestine Large intestine
13 chr4:174169600-174185600 Weak transcription Fetal Stomach stomach
14 chr4:174171400-174202600 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr4:174172000-174183400 Weak transcription Primary T cells from cord blood blood
16 chr4:174172200-174185400 Weak transcription Fetal Intestine Small intestine
17 chr4:174173600-174185400 Weak transcription Brain Angular Gyrus brain
18 chr4:174173600-174185600 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr4:174173600-174186000 Weak transcription Esophagus oesophagus
20 chr4:174173600-174190400 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr4:174173600-174202200 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr4:174173800-174178800 Weak transcription Brain Inferior Temporal Lobe brain
23 chr4:174173800-174178800 Weak transcription A549 lung
24 chr4:174173800-174184800 Weak transcription Duodenum Mucosa Duodenum
25 chr4:174173800-174185400 Weak transcription Brain Anterior Caudate brain
26 chr4:174174000-174178800 Weak transcription K562 blood
27 chr4:174174000-174179400 Weak transcription Primary B cells from cord blood blood
28 chr4:174174200-174185400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr4:174174200-174185600 Weak transcription Fetal Muscle Leg muscle
30 chr4:174174400-174185400 Weak transcription HSMMtube muscle
31 chr4:174174600-174182200 Weak transcription Stomach Mucosa stomach
32 chr4:174174600-174185400 Weak transcription HUVEC blood vessel
33 chr4:174174600-174195800 Weak transcription Primary monocytes fromperipheralblood blood
34 chr4:174175000-174185000 Weak transcription HSMM muscle
35 chr4:174175800-174179000 Enhancers iPS-18 Cell Line embryonic stem cell
36 chr4:174176200-174178000 Enhancers iPS-15b Cell Line embryonic stem cell
37 chr4:174176200-174178400 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr4:174176200-174179000 Enhancers iPS-20b Cell Line embryonic stem cell
39 chr4:174176200-174182800 Genic enhancers Fetal Thymus thymus
40 chr4:174176400-174179000 Enhancers ES-I3 Cell Line embryonic stem cell
41 chr4:174176400-174179200 Enhancers HUES64 Cell Line embryonic stem cell
42 chr4:174176400-174179600 Enhancers H1 Cell Line embryonic stem cell
43 chr4:174176600-174184600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr4:174176800-174178800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
45 chr4:174176800-174179600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr4:174177000-174178400 Enhancers Thymus Thymus
47 chr4:174177000-174179200 Enhancers Primary hematopoietic stem cells short term culture blood
48 chr4:174177000-174179400 Enhancers HUES6 Cell Line embryonic stem cell
49 chr4:174177000-174179800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr4:174177200-174178000 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015