The 2.0 version of rSNPBase

Variant report

Variant rs72993778
Chromosome Location chr4:174116612-174116613
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:174104000-174157200 Weak transcription Ovary ovary
2 chr4:174107000-174117800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr4:174107400-174120800 Weak transcription Fetal Muscle Leg muscle
4 chr4:174108800-174126800 Weak transcription Spleen Spleen
5 chr4:174110200-174118800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr4:174110600-174117000 Enhancers iPS-15b Cell Line embryonic stem cell
7 chr4:174111000-174116800 Enhancers HUES6 Cell Line embryonic stem cell
8 chr4:174111200-174116800 Enhancers HUES48 Cell Line embryonic stem cell
9 chr4:174112600-174131200 Weak transcription Colonic Mucosa Colon
10 chr4:174112800-174122800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr4:174112800-174126200 Weak transcription Pancreas Pancrea
12 chr4:174112800-174126400 Weak transcription Gastric stomach
13 chr4:174112800-174127000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr4:174112800-174140000 Weak transcription Aorta Aorta
15 chr4:174113000-174120400 Weak transcription HSMMtube muscle
16 chr4:174113400-174117400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr4:174113400-174132600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr4:174113800-174126200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr4:174113800-174138000 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr4:174114000-174123600 Weak transcription Fetal Intestine Large intestine
21 chr4:174114000-174125400 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr4:174114000-174130800 Weak transcription Brain Substantia Nigra brain
23 chr4:174114200-174120400 Weak transcription H9 Cell Line embryonic stem cell
24 chr4:174114200-174120400 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr4:174114200-174123200 Weak transcription Fetal Intestine Small intestine
26 chr4:174114200-174125200 Weak transcription Small Intestine intestine
27 chr4:174114200-174125600 Weak transcription A549 lung
28 chr4:174114200-174125800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr4:174114200-174126200 Weak transcription Esophagus oesophagus
30 chr4:174114200-174127000 Weak transcription Duodenum Mucosa Duodenum
31 chr4:174114200-174157800 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr4:174114400-174124200 Weak transcription Fetal Thymus thymus
33 chr4:174114400-174125200 Weak transcription Primary T cells from cord blood blood
34 chr4:174114600-174155000 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr4:174115200-174127200 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr4:174115400-174116800 Enhancers ES-I3 Cell Line embryonic stem cell
37 chr4:174115400-174117000 Enhancers Primary B cells from peripheral blood blood
38 chr4:174115400-174117000 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr4:174115400-174117000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr4:174115400-174117000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr4:174115600-174116800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
42 chr4:174115600-174117000 Enhancers Primary hematopoietic stem cells blood
43 chr4:174116000-174117000 Enhancers Primary monocytes fromperipheralblood blood
44 chr4:174116000-174117000 Enhancers Monocytes-CD14+_RO01746 blood
45 chr4:174116200-174117000 Enhancers Cortex derived primary cultured neurospheres brain
46 chr4:174116200-174117200 Genic enhancers Dnd41 blood
47 chr4:174116200-174117200 Enhancers GM12878-XiMat blood
48 chr4:174116400-174116800 Flanking Active TSS Primary B cells from cord blood blood
49 chr4:174116400-174116800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
50 chr4:174116400-174116800 Enhancers Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015