Variant report
| Variant | rs28672954 |
|---|---|
| Chromosome Location | chr3:50788235-50788236 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:59)
| rs_ID | r2[population] |
|---|---|
| rs13314195 | 0.87[AFR][1000 genomes] |
| rs13314257 | 0.87[AFR][1000 genomes] |
| rs13318236 | 0.87[AFR][1000 genomes] |
| rs13320650 | 0.87[AFR][1000 genomes] |
| rs13325993 | 1.00[AFR][1000 genomes] |
| rs28368540 | 0.87[AFR][1000 genomes] |
| rs28396534 | 0.87[AFR][1000 genomes] |
| rs28464421 | 0.87[AFR][1000 genomes] |
| rs28558907 | 0.87[AFR][1000 genomes] |
| rs28620855 | 0.87[AFR][1000 genomes] |
| rs28650958 | 0.87[AFR][1000 genomes] |
| rs28651223 | 0.87[AFR][1000 genomes] |
| rs28683561 | 0.87[AFR][1000 genomes] |
| rs28739431 | 0.87[AFR][1000 genomes] |
| rs9311459 | 0.87[AFR][1000 genomes] |
| rs9808930 | 0.87[AFR][1000 genomes] |
| rs9811552 | 1.00[AFR][1000 genomes] |
| rs9813134 | 1.00[AFR][1000 genomes] |
| rs9814288 | 1.00[AFR][1000 genomes] |
| rs9817243 | 0.87[AFR][1000 genomes] |
| rs9817755 | 0.87[AFR][1000 genomes] |
| rs9818282 | 0.87[AFR][1000 genomes] |
| rs9820588 | 0.87[AFR][1000 genomes] |
| rs9820926 | 0.87[AFR][1000 genomes] |
| rs9821821 | 0.87[AFR][1000 genomes] |
| rs9823104 | 1.00[AFR][1000 genomes] |
| rs9826083 | 0.87[AFR][1000 genomes] |
| rs9826750 | 0.87[AFR][1000 genomes] |
| rs9830477 | 1.00[AFR][1000 genomes] |
| rs9831449 | 0.87[AFR][1000 genomes] |
| rs9832673 | 1.00[AFR][1000 genomes] |
| rs9835512 | 0.87[AFR][1000 genomes] |
| rs9841588 | 0.87[AFR][1000 genomes] |
| rs9843246 | 0.87[AFR][1000 genomes] |
| rs9843508 | 1.00[AFR][1000 genomes] |
| rs9844965 | 0.87[AFR][1000 genomes] |
| rs9845360 | 0.87[AFR][1000 genomes] |
| rs9846899 | 1.00[AFR][1000 genomes] |
| rs9847649 | 1.00[AFR][1000 genomes] |
| rs9851205 | 1.00[AFR][1000 genomes] |
| rs9854772 | 1.00[AFR][1000 genomes] |
| rs9856440 | 1.00[AFR][1000 genomes] |
| rs9860659 | 1.00[AFR][1000 genomes] |
| rs9861750 | 0.87[AFR][1000 genomes] |
| rs9863694 | 0.87[AFR][1000 genomes] |
| rs9869000 | 0.87[AFR][1000 genomes] |
| rs9869309 | 0.87[AFR][1000 genomes] |
| rs9870101 | 0.87[AFR][1000 genomes] |
| rs9870326 | 1.00[AFR][1000 genomes] |
| rs9872828 | 1.00[AFR][1000 genomes] |
| rs9873164 | 0.87[AFR][1000 genomes] |
| rs9875271 | 0.87[AFR][1000 genomes] |
| rs9876984 | 0.87[AFR][1000 genomes] |
| rs9878306 | 0.87[AFR][1000 genomes] |
| rs9878542 | 0.87[AFR][1000 genomes] |
| rs9879398 | 1.00[AFR][1000 genomes] |
| rs9879630 | 1.00[AFR][1000 genomes] |
| rs9989957 | 0.87[AFR][1000 genomes] |
| rs9989974 | 0.87[AFR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:50776000-50789000 | Weak transcription | Brain Hippocampus Middle | brain |
| 2 | chr3:50776000-50790000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
