The 2.0 version of rSNPBase

Variant report

Variant rs28708490
Chromosome Location chr7:26408915-26408916
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:26375000-26414000 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr7:26384800-26409400 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr7:26385600-26414200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr7:26387400-26409400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr7:26387800-26409400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr7:26388000-26409400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr7:26389000-26413200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr7:26397000-26409400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr7:26398600-26415400 Weak transcription HMEC breast
10 chr7:26402600-26415200 Enhancers Liver Liver
11 chr7:26403800-26415600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr7:26404800-26409400 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr7:26404800-26409400 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr7:26404800-26409600 Weak transcription Duodenum Mucosa Duodenum
15 chr7:26404800-26411200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr7:26404800-26414000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr7:26404800-26415200 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr7:26405000-26409000 Strong transcription Primary monocytes fromperipheralblood blood
19 chr7:26405000-26409400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr7:26405000-26409400 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr7:26405200-26409200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr7:26405200-26413800 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr7:26405200-26414000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr7:26405400-26409000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr7:26405400-26409000 Strong transcription Primary B cells from peripheral blood blood
26 chr7:26405400-26409400 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr7:26405400-26413800 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr7:26405400-26414600 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr7:26405800-26409200 Weak transcription HUVEC blood vessel
30 chr7:26405800-26414600 Weak transcription K562 blood
31 chr7:26406000-26409400 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr7:26406200-26409400 Weak transcription Primary T helper cells fromperipheralblood blood
33 chr7:26406200-26409400 Weak transcription Fetal Intestine Large intestine
34 chr7:26406400-26409400 Weak transcription Fetal Lung lung
35 chr7:26407000-26409000 Weak transcription Dnd41 blood
36 chr7:26407000-26409400 Weak transcription Adipose Nuclei Adipose
37 chr7:26407000-26409400 Weak transcription Brain Angular Gyrus brain
38 chr7:26407000-26411200 Weak transcription Fetal Intestine Small intestine
39 chr7:26407200-26409400 Weak transcription Primary T cells from cord blood blood
40 chr7:26407400-26409400 Weak transcription Thymus Thymus
41 chr7:26407400-26411800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr7:26407400-26412000 Weak transcription Placenta Placenta
43 chr7:26407400-26415400 Weak transcription HepG2 liver
44 chr7:26407400-26415600 Weak transcription Spleen Spleen
45 chr7:26407600-26409200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr7:26407600-26409200 Weak transcription Fetal Thymus thymus
47 chr7:26407600-26409400 Weak transcription GM12878-XiMat blood
48 chr7:26407600-26413800 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr7:26407600-26415400 Weak transcription Primary T cells fromperipheralblood blood
50 chr7:26408000-26409400 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015