The 2.0 version of rSNPBase

Variant report

Variant rs28722753
Chromosome Location chr3:78986874-78986875
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:78959600-78987200 Weak transcription Fetal Lung lung
2 chr3:78963200-78991000 Weak transcription Fetal Brain Male brain
3 chr3:78967200-78987200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr3:78967200-79000600 Weak transcription Fetal Kidney kidney
5 chr3:78968800-78987200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr3:78969000-78990800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr3:78969000-78991000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr3:78969200-78990400 Weak transcription NHEK skin
9 chr3:78969600-79000600 Weak transcription HepG2 liver
10 chr3:78970400-78991000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr3:78975600-78987200 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr3:78977200-78990800 Weak transcription Psoas Muscle Psoas
13 chr3:78977400-78987200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr3:78977400-78987200 Weak transcription Fetal Stomach stomach
15 chr3:78978400-78992200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr3:78978800-78990800 Weak transcription H1 Cell Line embryonic stem cell
17 chr3:78979600-78987000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr3:78979600-78987200 Weak transcription Aorta Aorta
19 chr3:78980600-78989400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr3:78981600-78991600 Weak transcription Fetal Heart heart
21 chr3:78982400-79001800 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr3:78982800-78987200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr3:78983800-78989200 Weak transcription Colon Smooth Muscle Colon
24 chr3:78984400-78990200 Weak transcription Osteobl bone
25 chr3:78985000-78987200 Weak transcription Fetal Muscle Trunk muscle
26 chr3:78985200-78989200 Weak transcription Brain Substantia Nigra brain
27 chr3:78985400-78987200 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr3:78985600-78987200 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr3:78985800-78987200 Weak transcription Fetal Muscle Leg muscle
30 chr3:78985800-78987400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr3:78985800-78987600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr3:78985800-78989000 Weak transcription Placenta Placenta
33 chr3:78985800-78989800 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr3:78985800-78990400 Weak transcription NHDF-Ad bronchial
35 chr3:78986000-78990600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr3:78986000-78990800 Weak transcription NHLF lung
37 chr3:78986200-78987800 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr3:78986200-78989000 Weak transcription Brain Germinal Matrix brain
39 chr3:78986200-78989800 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr3:78986200-78990800 Weak transcription Primary T cells from cord blood blood
41 chr3:78986400-78989600 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr3:78986800-78992200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015