Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs11721243	0.85[AFR][1000 genomes]
rs13327009	0.95[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs1398063	0.83[AFR][1000 genomes]
rs1398071	0.83[AFR][1000 genomes]
rs1553915	0.86[AFR][1000 genomes]
rs1910585	0.88[AFR][1000 genomes]
rs2203119	0.81[AFR][1000 genomes]
rs4643714	0.83[AFR][1000 genomes]
rs6781321	0.93[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs6806088	0.90[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs73098738	0.83[AFR][1000 genomes]
rs73098744	0.83[AFR][1000 genomes]
rs73098747	0.85[AFR][1000 genomes]
rs73098748	0.83[AFR][1000 genomes]
rs7432610	0.88[AFR][1000 genomes]
rs874817	0.83[AFR][1000 genomes]
rs874818	0.83[AFR][1000 genomes]
rs874819	0.81[AFR][1000 genomes]
rs874820	0.83[AFR][1000 genomes]
rs9810990	0.83[AFR][1000 genomes]
rs9813609	0.85[AFR][1000 genomes]
rs9826082	0.95[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs9837907	0.88[EUR][1000 genomes]
rs9838903	0.81[AFR][1000 genomes]
rs9857983	0.83[AFR][1000 genomes]
rs9858470	0.83[AFR][1000 genomes]
rs9859225	0.85[AFR][1000 genomes]
rs9859249	0.85[AFR][1000 genomes]
rs9867258	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9867536	0.83[AFR][1000 genomes]
rs9872808	0.83[AFR][1000 genomes]
rs9875703	0.83[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1009857	chr3:68696340-68746434	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68703000-68705600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr3:68703600-68704600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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