Variant report
Variant | rs28767840 |
---|---|
Chromosome Location | chr14:70208895-70208896 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:3 , 50 per page) page:
1
No data |
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Variant related genes | Relation type |
---|---|
ENSG00000100650 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs11848277 | 1.00[EUR][1000 genomes] |
rs2069109 | 1.00[EUR][1000 genomes] |
rs28456261 | 1.00[EUR][1000 genomes] |
rs28468655 | 1.00[EUR][1000 genomes] |
rs56837831 | 1.00[EUR][1000 genomes] |
rs61059545 | 1.00[EUR][1000 genomes] |
rs61130025 | 1.00[EUR][1000 genomes] |
rs7160953 | 0.80[AFR][1000 genomes] |
rs73281568 | 1.00[EUR][1000 genomes] |
rs8022592 | 1.00[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv456336 | chr14:70081956-70574149 | Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 75 gene(s) | inside rSNPs | diseases |
2 | nsv565007 | chr14:70081956-70574149 | Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 75 gene(s) | inside rSNPs | diseases |
No data |