Variant report
| Variant | rs28842563 |
|---|---|
| Chromosome Location | chr10:117111910-117111911 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr10:117105039..117107956-chr10:117111600..117114129,2 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:45)
| rs_ID | r2[population] |
|---|---|
| rs10399963 | 1.00[EUR][1000 genomes] |
| rs10400160 | 1.00[EUR][1000 genomes] |
| rs10466204 | 1.00[EUR][1000 genomes] |
| rs10885665 | 1.00[EUR][1000 genomes] |
| rs11197082 | 1.00[EUR][1000 genomes] |
| rs11197089 | 1.00[EUR][1000 genomes] |
| rs11197090 | 1.00[EUR][1000 genomes] |
| rs11197092 | 1.00[EUR][1000 genomes] |
| rs11197096 | 1.00[EUR][1000 genomes] |
| rs11197097 | 1.00[EUR][1000 genomes] |
| rs11197104 | 1.00[EUR][1000 genomes] |
| rs11197119 | 1.00[EUR][1000 genomes] |
| rs11197121 | 1.00[EUR][1000 genomes] |
| rs11819446 | 1.00[EUR][1000 genomes] |
| rs12098502 | 1.00[EUR][1000 genomes] |
| rs12241864 | 1.00[EUR][1000 genomes] |
| rs12248612 | 1.00[EUR][1000 genomes] |
| rs12248846 | 1.00[EUR][1000 genomes] |
| rs13376959 | 1.00[EUR][1000 genomes] |
| rs2197305 | 1.00[EUR][1000 genomes] |
| rs2252627 | 1.00[EUR][1000 genomes] |
| rs28564357 | 1.00[EUR][1000 genomes] |
| rs60927673 | 1.00[EUR][1000 genomes] |
| rs7069988 | 1.00[EUR][1000 genomes] |
| rs7077627 | 1.00[EUR][1000 genomes] |
| rs7082592 | 1.00[EUR][1000 genomes] |
| rs7085221 | 1.00[EUR][1000 genomes] |
| rs7093931 | 1.00[EUR][1000 genomes] |
| rs7097441 | 1.00[EUR][1000 genomes] |
| rs7098585 | 1.00[EUR][1000 genomes] |
| rs73363470 | 1.00[EUR][1000 genomes] |
| rs7893964 | 1.00[EUR][1000 genomes] |
| rs7894112 | 1.00[EUR][1000 genomes] |
| rs7896027 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7897375 | 1.00[EUR][1000 genomes] |
| rs7899771 | 1.00[EUR][1000 genomes] |
| rs7902966 | 1.00[EUR][1000 genomes] |
| rs7906551 | 1.00[EUR][1000 genomes] |
| rs7907668 | 1.00[EUR][1000 genomes] |
| rs7908005 | 1.00[EUR][1000 genomes] |
| rs7910204 | 1.00[EUR][1000 genomes] |
| rs7913288 | 1.00[EUR][1000 genomes] |
| rs7917672 | 1.00[EUR][1000 genomes] |
| rs7918291 | 1.00[EUR][1000 genomes] |
| rs7920260 | 1.00[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:117105000-117113400 | Weak transcription | Aorta | Aorta |
