Variant report

Variant	rs28872799
Chromosome Location	chr6:11882362-11882363
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10947625	0.97[ASN][1000 genomes]
rs10947626	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16872016	1.00[ASN][1000 genomes]
rs7341230	0.97[ASN][1000 genomes]
rs7341232	0.97[ASN][1000 genomes]
rs9348998	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9348999	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9349012	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9368949	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9368951	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9368952	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9368954	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9368956	0.97[ASN][1000 genomes]
rs9368962	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9368968	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9380581	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9380600	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9380623	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9394369	1.00[ASN][1000 genomes]
rs9394370	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9394383	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9470330	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11869000-11885400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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