Variant report

Variant	rs2888257
Chromosome Location	chr14:83034230-83034231
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs17117324	1.00[EUR][1000 genomes]
rs2135583	1.00[EUR][1000 genomes]
rs7157030	1.00[EUR][1000 genomes]
rs7157748	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73343607	1.00[EUR][1000 genomes]
rs73343612	1.00[EUR][1000 genomes]
rs73343613	1.00[EUR][1000 genomes]
rs73360736	1.00[EUR][1000 genomes]
rs73360750	1.00[EUR][1000 genomes]
rs73360772	1.00[EUR][1000 genomes]
rs73360774	1.00[EUR][1000 genomes]
rs73360778	1.00[EUR][1000 genomes]
rs73360779	1.00[EUR][1000 genomes]
rs8009617	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051581	chr14:82829319-83051904	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv832842	chr14:82871181-83054768	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv1054303	chr14:83018016-83258920	Flanking Active TSS Weak transcription Active TSS Enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:83033800-83034600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr14:83034000-83034400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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