Variant report

Variant	rs17117324
Chromosome Location	chr14:83230116-83230117
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10484138	1.00[EUR][1000 genomes]
rs12587660	1.00[EUR][1000 genomes]
rs12590200	1.00[EUR][1000 genomes]
rs17117330	1.00[EUR][1000 genomes]
rs17117384	1.00[EUR][1000 genomes]
rs17117392	1.00[EUR][1000 genomes]
rs17117436	1.00[EUR][1000 genomes]
rs2888257	1.00[EUR][1000 genomes]
rs35768970	1.00[EUR][1000 genomes]
rs60697834	1.00[EUR][1000 genomes]
rs7150950	1.00[EUR][1000 genomes]
rs7157030	1.00[EUR][1000 genomes]
rs7157748	1.00[EUR][1000 genomes]
rs73343607	1.00[EUR][1000 genomes]
rs73343612	1.00[EUR][1000 genomes]
rs73343613	1.00[EUR][1000 genomes]
rs73360736	1.00[EUR][1000 genomes]
rs73360750	1.00[EUR][1000 genomes]
rs73360772	1.00[EUR][1000 genomes]
rs73360774	1.00[EUR][1000 genomes]
rs73360778	1.00[EUR][1000 genomes]
rs73360779	1.00[EUR][1000 genomes]
rs74067029	1.00[EUR][1000 genomes]
rs74067169	1.00[EUR][1000 genomes]
rs74067184	1.00[EUR][1000 genomes]
rs74067185	1.00[EUR][1000 genomes]
rs74067200	1.00[EUR][1000 genomes]
rs74067202	1.00[EUR][1000 genomes]
rs74069203	1.00[EUR][1000 genomes]
rs74069241	1.00[EUR][1000 genomes]
rs74069243	1.00[EUR][1000 genomes]
rs74069244	1.00[EUR][1000 genomes]
rs74069245	1.00[EUR][1000 genomes]
rs74069248	1.00[EUR][1000 genomes]
rs74069249	1.00[EUR][1000 genomes]
rs74069251	1.00[EUR][1000 genomes]
rs8009617	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1054303	chr14:83018016-83258920	Flanking Active TSS Weak transcription Active TSS Enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv902124	chr14:83165520-83282163	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv902125	chr14:83196006-83245454	Active TSS Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:83229800-83230400	Enhancers	Fetal Stomach	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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