Variant report

Variant	rs28914488
Chromosome Location	chr1:179128895-179128896
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:179097406..179100383-chr1:179127242..179129431,2	MCF-7	breast:
2	chr1:179126205..179128954-chr1:179131853..179134675,3	K562	blood:

rs_ID	r²[population]
rs55697941	1.00[AFR][1000 genomes]
rs56093002	1.00[AFR][1000 genomes]

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:179112400-179133000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr1:179112400-179139000	Weak transcription	K562	blood
3	chr1:179113200-179133000	Weak transcription	Hela-S3	cervix
4	chr1:179116200-179133000	Weak transcription	NHDF-Ad	bronchial
5	chr1:179116400-179133400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr1:179117800-179133000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr1:179117800-179186000	Weak transcription	Fetal Stomach	stomach
8	chr1:179119000-179135200	Weak transcription	Primary hematopoietic stem cells	blood
9	chr1:179119600-179133000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr1:179120200-179133800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr1:179121200-179136200	Weak transcription	Duodenum Smooth Muscle	Duodenum
12	chr1:179121800-179135800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
13	chr1:179121800-179138400	Weak transcription	Aorta	Aorta
14	chr1:179122000-179135000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
15	chr1:179122000-179139000	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr1:179122000-179189400	Weak transcription	Primary B cells from cord blood	blood
17	chr1:179122400-179153000	Weak transcription	Primary T cells from cord blood	blood
18	chr1:179122800-179139000	Weak transcription	Lung	lung
19	chr1:179122800-179141600	Weak transcription	Fetal Intestine Large	intestine
20	chr1:179123000-179133000	Weak transcription	Muscle Satellite Cultured Cells	--
21	chr1:179123400-179133000	Weak transcription	A549	lung
22	chr1:179123400-179136200	Weak transcription	Colon Smooth Muscle	Colon
23	chr1:179124200-179139000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr1:179126000-179133000	Weak transcription	HepG2	liver
25	chr1:179127400-179139200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
26	chr1:179128400-179129200	Enhancers	HSMM	muscle
27	chr1:179128400-179129400	Weak transcription	Pancreatic Islets	Pancreatic Islet
28	chr1:179128600-179133400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr1:179128800-179133000	Weak transcription	HSMMtube	muscle

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