The 2.0 version of rSNPBase

Variant report

Variant rs28917222
Chromosome Location chr5:151121996-151121997
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:151098000-151124800 Weak transcription Aorta Aorta
2 chr5:151101800-151124800 Weak transcription Gastric stomach
3 chr5:151108000-151122600 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr5:151108600-151122800 Weak transcription Thymus Thymus
5 chr5:151110800-151122200 Weak transcription Dnd41 blood
6 chr5:151110800-151122400 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr5:151112400-151125000 Weak transcription Esophagus oesophagus
8 chr5:151116800-151122200 Weak transcription Spleen Spleen
9 chr5:151117200-151122200 Weak transcription HepG2 liver
10 chr5:151117800-151122200 Weak transcription Primary B cells from cord blood blood
11 chr5:151117800-151122400 Enhancers HUVEC blood vessel
12 chr5:151118400-151123000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr5:151119000-151122000 Enhancers Placenta Placenta
14 chr5:151119000-151122200 Enhancers HMEC breast
15 chr5:151119800-151122000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr5:151120000-151124600 Weak transcription Lung lung
17 chr5:151120000-151137600 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr5:151120200-151122200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr5:151120200-151122800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr5:151120200-151123600 Weak transcription Colonic Mucosa Colon
21 chr5:151120200-151124600 Weak transcription Left Ventricle heart
22 chr5:151120200-151124600 Weak transcription Right Ventricle heart
23 chr5:151120200-151137000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr5:151120200-151137200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr5:151120400-151122000 Weak transcription Fetal Brain Female brain
26 chr5:151120400-151122200 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr5:151120400-151124400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr5:151120400-151124600 Weak transcription Fetal Brain Male brain
29 chr5:151120600-151122200 Enhancers Adipose Nuclei Adipose
30 chr5:151120600-151122200 Weak transcription Fetal Kidney kidney
31 chr5:151120600-151122200 Weak transcription Fetal Lung lung
32 chr5:151120600-151122200 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr5:151120600-151122200 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr5:151120600-151122400 Weak transcription Primary T cells fromperipheralblood blood
35 chr5:151120600-151122400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr5:151120600-151122600 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr5:151120600-151122600 Weak transcription Brain Anterior Caudate brain
38 chr5:151120600-151122600 Weak transcription Fetal Intestine Large intestine
39 chr5:151120600-151122800 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr5:151120600-151123600 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr5:151120600-151123800 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr5:151120600-151124000 Weak transcription K562 blood
43 chr5:151120600-151125000 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr5:151120600-151132400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr5:151120600-151135000 Weak transcription ES-I3 Cell Line embryonic stem cell
46 chr5:151120800-151122000 Weak transcription Brain Cingulate Gyrus brain
47 chr5:151120800-151122000 Weak transcription Brain Substantia Nigra brain
48 chr5:151120800-151122000 Weak transcription Fetal Thymus thymus
49 chr5:151120800-151122200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr5:151120800-151122200 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015