Variant report

Variant	rs6579911
Chromosome Location	chr5:151257376-151257377
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs17741838	0.80[AFR][1000 genomes]
rs28917222	1.00[AMR][1000 genomes]
rs28917225	1.00[AMR][1000 genomes]
rs57637894	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6867160	0.80[AFR][1000 genomes]
rs6891463	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7712774	1.00[AMR][1000 genomes]
rs7731695	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7734998	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1808837	chr5:151238149-151260215	Enhancers Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151235200-151264200	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr5:151256600-151259400	Weak transcription	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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