The 2.0 version of rSNPBase

Variant report

Variant rs289884
Chromosome Location chr2:152107214-152107215
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:152094400-152117000 Weak transcription A549 lung
2 chr2:152101600-152117200 Weak transcription Fetal Kidney kidney
3 chr2:152102000-152116600 Weak transcription Pancreas Pancrea
4 chr2:152103400-152117600 Weak transcription Gastric stomach
5 chr2:152103800-152117600 Weak transcription Esophagus oesophagus
6 chr2:152104400-152107800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr2:152104400-152117200 Weak transcription Colonic Mucosa Colon
8 chr2:152104600-152107800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr2:152104600-152117200 Weak transcription Stomach Mucosa stomach
10 chr2:152105200-152109800 Strong transcription Rectal Mucosa Donor 29 rectum
11 chr2:152105200-152111800 Strong transcription Fetal Adrenal Gland Adrenal Gland
12 chr2:152105400-152107800 Strong transcription HSMM muscle
13 chr2:152105800-152107400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr2:152105800-152107600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr2:152105800-152107600 Weak transcription Right Ventricle heart
16 chr2:152105800-152108000 Strong transcription Colon Smooth Muscle Colon
17 chr2:152105800-152108000 Strong transcription HSMMtube muscle
18 chr2:152105800-152108400 Strong transcription Cortex derived primary cultured neurospheres brain
19 chr2:152105800-152109400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr2:152105800-152110000 Weak transcription Rectal Smooth Muscle rectum
21 chr2:152105800-152110200 Weak transcription Lung lung
22 chr2:152105800-152111400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
23 chr2:152105800-152112200 Strong transcription Adipose Nuclei Adipose
24 chr2:152105800-152112400 Strong transcription Liver Liver
25 chr2:152105800-152114600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr2:152105800-152116800 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr2:152105800-152116800 Weak transcription K562 blood
28 chr2:152105800-152117200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr2:152105800-152117200 Weak transcription Brain Cingulate Gyrus brain
30 chr2:152106000-152107800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr2:152106000-152109000 Strong transcription Duodenum Mucosa Duodenum
32 chr2:152106000-152109800 Strong transcription Primary B cells from peripheral blood blood
33 chr2:152106000-152111400 Strong transcription Primary hematopoietic stem cells short term culture blood
34 chr2:152106000-152111400 Strong transcription Stomach Smooth Muscle stomach
35 chr2:152106000-152112600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr2:152106200-152108400 Weak transcription Spleen Spleen
37 chr2:152106200-152110600 Strong transcription Primary T helper naive cells fromperipheralblood blood
38 chr2:152106400-152107400 Weak transcription NH-A brain
39 chr2:152106400-152107600 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr2:152106400-152107800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr2:152106400-152108200 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr2:152106400-152109000 Strong transcription Skeletal Muscle Male skeletal muscle
43 chr2:152106400-152109400 Strong transcription Fetal Thymus thymus
44 chr2:152106400-152110400 Strong transcription Primary monocytes fromperipheralblood blood
45 chr2:152106400-152110400 Strong transcription Primary hematopoietic stem cells blood
46 chr2:152106400-152112000 Strong transcription Primary T cells fromperipheralblood blood
47 chr2:152106400-152112400 Strong transcription Primary T cells from cord blood blood
48 chr2:152106400-152112400 Strong transcription Primary T regulatory cells fromperipheralblood blood
49 chr2:152106400-152113600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr2:152106400-152116800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015