Variant report

Variant rs2898949
Chromosome Location chr11:4164967-4164968
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:4126600-4166600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr11:4148800-4165200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr11:4149600-4169400 Weak transcription Pancreas Pancrea
4 chr11:4153400-4165200 Weak transcription Rectal Smooth Muscle rectum
5 chr11:4157000-4166000 Weak transcription NH-A brain
6 chr11:4159400-4165000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr11:4159400-4165000 Strong transcription Fetal Thymus thymus
8 chr11:4159400-4165200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr11:4159400-4168000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr11:4160000-4169200 Weak transcription NHLF lung
11 chr11:4160000-4172200 Weak transcription NHEK skin
12 chr11:4160400-4165000 Weak transcription Brain Substantia Nigra brain
13 chr11:4160400-4166000 Weak transcription Placenta Placenta
14 chr11:4160600-4165800 Strong transcription Thymus Thymus
15 chr11:4161200-4165200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr11:4161200-4166800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr11:4161400-4166000 Weak transcription Fetal Heart heart
18 chr11:4161400-4166400 Weak transcription HUVEC blood vessel
19 chr11:4161400-4169400 Weak transcription Brain Anterior Caudate brain
20 chr11:4161600-4165000 Strong transcription HUES48 Cell Line embryonic stem cell
21 chr11:4161600-4165000 Weak transcription Liver Liver
22 chr11:4161600-4165200 Weak transcription Hela-S3 cervix
23 chr11:4161600-4165400 Strong transcription Dnd41 blood
24 chr11:4161600-4179600 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr11:4161800-4166800 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr11:4162400-4165000 Strong transcription GM12878-XiMat blood
27 chr11:4162400-4165200 Strong transcription Fetal Adrenal Gland Adrenal Gland
28 chr11:4162400-4165800 Strong transcription Fetal Muscle Trunk muscle
29 chr11:4162400-4166000 Strong transcription Primary T cells from cord blood blood
30 chr11:4162400-4166000 Weak transcription Brain Inferior Temporal Lobe brain
31 chr11:4162400-4166200 Strong transcription Cortex derived primary cultured neurospheres brain
32 chr11:4162400-4166400 Weak transcription Muscle Satellite Cultured Cells --
33 chr11:4162400-4167400 Weak transcription Esophagus oesophagus
34 chr11:4162400-4167400 Weak transcription Fetal Stomach stomach
35 chr11:4162400-4167600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr11:4162400-4168200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr11:4162400-4168200 Weak transcription Fetal Kidney kidney
38 chr11:4162400-4169400 Weak transcription Brain Germinal Matrix brain
39 chr11:4162400-4172200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr11:4162600-4165600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr11:4162600-4166000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr11:4162600-4166000 Strong transcription A549 lung
43 chr11:4162600-4166400 Weak transcription Primary neutrophils fromperipheralblood blood
44 chr11:4162600-4167200 Weak transcription Brain Cingulate Gyrus brain
45 chr11:4162600-4167200 Weak transcription HMEC breast
46 chr11:4162600-4167800 Weak transcription Spleen Spleen
47 chr11:4162800-4166600 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr11:4163000-4165000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr11:4163000-4165000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr11:4163000-4166000 Weak transcription Ovary ovary

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