Variant report

Variant	rs2907520
Chromosome Location	chr10:117517892-117517893
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 87 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:87)

rs_ID	r²[population]
rs11598238	0.83[AFR][1000 genomes]
rs12766958	0.87[AFR][1000 genomes]
rs12767442	0.82[AFR][1000 genomes]
rs2532696	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2532697	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2532698	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2532700	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2532702	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2532703	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2532708	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2532710	0.95[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2532711	0.87[AFR][1000 genomes]
rs2532715	0.84[AFR][1000 genomes]
rs2804167	0.87[AFR][1000 genomes]
rs2804168	0.87[AFR][1000 genomes]
rs2804169	0.87[AFR][1000 genomes]
rs2804170	0.95[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2804171	0.94[AFR][1000 genomes]
rs2804172	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907517	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907518	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907519	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907521	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907522	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907524	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907527	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907528	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907530	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907532	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907533	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907534	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907535	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907536	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907538	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907539	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907540	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907541	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907542	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907589	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907590	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2907592	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960636	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960637	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960638	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960639	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960640	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960642	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960643	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960644	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960646	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960647	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960648	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960649	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960652	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960654	0.87[AFR][1000 genomes]
rs2960693	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960694	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960695	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960696	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960697	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960698	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960699	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960700	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960701	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960702	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960703	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960704	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960705	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960707	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960708	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960710	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960711	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960712	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960713	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960716	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960717	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960718	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960721	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960727	0.99[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960728	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960731	0.95[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2960733	0.93[AFR][1000 genomes]
rs3095132	0.84[AFR][1000 genomes]
rs3095133	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs3095134	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs3095135	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs3110772	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117489400-117520800	Weak transcription	HSMM	muscle
2	chr10:117516600-117518600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr10:117517800-117519000	Enhancers	ES-I3 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links