Variant report

Variant	rs2920660
Chromosome Location	chr8:6319647-6319648
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:6308680..6311330-chr8:6317325..6320400,3	K562	blood:

Extended variants
information (count: 199 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:186)

rs_ID	r²[population]
rs1031309	0.94[CEU][hapmap]
rs1054073	0.96[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.93[TSI][hapmap];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1054074	0.83[EUR][1000 genomes]
rs11137028	0.92[CHB][hapmap];0.85[CHD][hapmap];0.81[ASN][1000 genomes]
rs11137029	0.83[CHB][hapmap];0.94[JPT][hapmap];0.91[ASN][1000 genomes]
rs11137033	0.89[JPT][hapmap]
rs1129703	0.96[CHD][hapmap];0.90[GIH][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1129704	0.94[JPT][hapmap];0.86[EUR][1000 genomes]
rs1129706	0.96[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.97[TSI][hapmap];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12545613	0.90[ASN][1000 genomes]
rs12545939	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12546890	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12550299	0.83[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs12674488	0.81[CEU][hapmap];0.85[CHD][hapmap];0.89[JPT][hapmap]
rs12675930	0.83[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs12676907	0.83[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs12676922	0.83[CHB][hapmap];0.94[JPT][hapmap];0.91[ASN][1000 genomes]
rs12677501	0.89[JPT][hapmap]
rs12679619	0.85[CHD][hapmap];0.94[JPT][hapmap]
rs12681195	0.88[ASN][1000 genomes]
rs13248420	0.93[CEU][hapmap];0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs13267816	0.89[JPT][hapmap]
rs13281793	0.82[ASN][1000 genomes]
rs13281967	0.93[CEU][hapmap];0.92[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs13282022	0.93[CEU][hapmap];0.92[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs13282116	0.82[ASN][1000 genomes]
rs13282577	0.93[CEU][hapmap];0.92[CHB][hapmap];0.96[CHD][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs1373306	0.93[TSI][hapmap];0.83[EUR][1000 genomes]
rs1373307	0.94[JPT][hapmap];0.86[EUR][1000 genomes]
rs1530408	0.84[GIH][hapmap]
rs1550690	0.92[CHB][hapmap];0.93[JPT][hapmap];0.87[ASN][1000 genomes]
rs1550697	0.91[GIH][hapmap]
rs17077031	0.90[ASN][1000 genomes]
rs17077056	0.83[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs17077067	0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs17077083	0.93[CEU][hapmap];0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs17077094	0.93[CEU][hapmap];0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs17077109	0.89[JPT][hapmap]
rs17613024	0.93[CEU][hapmap];0.85[CHD][hapmap];0.94[JPT][hapmap]
rs1867385	0.83[GIH][hapmap];0.94[JPT][hapmap];0.93[TSI][hapmap];0.83[EUR][1000 genomes]
rs1867386	1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.97[TSI][hapmap];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1868551	0.92[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.97[TSI][hapmap];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1966818	0.84[JPT][hapmap]
rs2034143	0.91[GIH][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap];0.88[EUR][1000 genomes]
rs2053618	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2166006	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2251956	0.94[JPT][hapmap];0.80[ASN][1000 genomes]
rs2254903	0.82[CHD][hapmap];0.94[JPT][hapmap];0.83[TSI][hapmap];0.82[ASN][1000 genomes]
rs2277136	0.93[CEU][hapmap];0.89[CHD][hapmap];0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs2305022	0.91[GIH][hapmap];0.80[TSI][hapmap]
rs2440392	1.00[CEU][hapmap];0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2440395	0.91[ASN][1000 genomes]
rs2440396	0.94[JPT][hapmap]
rs2440397	0.94[JPT][hapmap]
rs2440400	0.86[EUR][1000 genomes]
rs2440401	0.94[CEU][hapmap];0.86[EUR][1000 genomes]
rs2440402	0.86[EUR][1000 genomes]
rs2440403	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2440406	1.00[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs2440408	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2440411	0.86[EUR][1000 genomes]
rs2440412	0.94[JPT][hapmap];0.86[EUR][1000 genomes]
rs2440413	0.86[EUR][1000 genomes]
rs2440414	1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.97[TSI][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2440415	0.83[EUR][1000 genomes]
rs2440416	0.92[CHD][hapmap];0.87[GIH][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2440422	0.89[JPT][hapmap];0.80[EUR][1000 genomes]
rs2440423	0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs2440424	0.82[CHD][hapmap];0.94[JPT][hapmap];0.83[TSI][hapmap];0.82[ASN][1000 genomes]
rs2440427	0.84[JPT][hapmap]
rs2440428	0.89[JPT][hapmap]
rs2440432	0.92[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs2442485	0.92[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs2442491	0.81[CEU][hapmap];0.93[JPT][hapmap]
rs2442493	0.94[JPT][hapmap]
rs2442497	0.83[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs2442499	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2442500	1.00[CEU][hapmap];0.92[JPT][hapmap];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2442502	0.94[GIH][hapmap];0.94[JPT][hapmap];0.93[TSI][hapmap];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2442503	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2442505	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2442506	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2442507	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2442510	0.96[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.97[TSI][hapmap];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2442511	0.96[CHD][hapmap];0.87[GIH][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2442512	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2442514	0.89[JPT][hapmap];0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2442515	0.82[ASN][1000 genomes]
rs2442516	0.89[JPT][hapmap];0.80[EUR][1000 genomes]
rs2442517	0.89[JPT][hapmap]
rs2442518	0.82[CEU][hapmap];0.86[CHD][hapmap];0.87[GIH][hapmap];0.94[JPT][hapmap];0.93[TSI][hapmap];0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2442519	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2442520	0.81[ASN][1000 genomes]
rs2442521	0.85[JPT][hapmap];0.80[EUR][1000 genomes]
rs2442522	0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs2442523	0.84[JPT][hapmap];0.80[EUR][1000 genomes]
rs2442524	0.84[JPT][hapmap]
rs2442533	0.84[GIH][hapmap]
rs2442546	0.91[GIH][hapmap]
rs2515564	0.88[JPT][hapmap]
rs2515565	0.84[JPT][hapmap]
rs2515568	0.83[EUR][1000 genomes]
rs2515570	0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2515571	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2515572	0.87[GIH][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap];0.86[EUR][1000 genomes]
rs2515573	0.83[EUR][1000 genomes]
rs2515576	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2515581	0.86[EUR][1000 genomes]
rs2515582	0.92[CEU][hapmap];0.86[EUR][1000 genomes]
rs2515583	0.94[CEU][hapmap];0.86[EUR][1000 genomes]
rs2515585	0.93[CEU][hapmap];0.94[JPT][hapmap]
rs2515592	0.85[ASN][1000 genomes]
rs2916723	0.84[ASN][1000 genomes]
rs2916733	0.83[ASW][hapmap];0.94[CEU][hapmap];0.85[TSI][hapmap];0.89[EUR][1000 genomes]
rs2916734	0.94[CEU][hapmap];0.86[EUR][1000 genomes]
rs2916737	0.94[CEU][hapmap];0.88[EUR][1000 genomes]
rs2916738	0.94[CEU][hapmap];0.88[EUR][1000 genomes]
rs2916739	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2916740	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2916741	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.93[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2916742	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.96[TSI][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2916743	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2916745	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2916746	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[MEX][hapmap];0.90[TSI][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2916750	0.96[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.96[TSI][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2920658	0.94[CEU][hapmap];0.87[EUR][1000 genomes]
rs2920659	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2920661	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2920662	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2920665	0.89[JPT][hapmap];0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2920666	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2920668	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2920669	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2920671	1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2920674	1.00[CEU][hapmap];0.94[JPT][hapmap]
rs2920676	0.92[CHB][hapmap];0.85[CHD][hapmap];0.81[ASN][1000 genomes]
rs2920677	0.88[JPT][hapmap]
rs2920681	0.83[CEU][hapmap];0.92[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs2920689	0.89[JPT][hapmap]
rs2922811	0.89[JPT][hapmap]
rs2922813	0.88[JPT][hapmap]
rs2922814	0.89[JPT][hapmap]
rs2922815	0.89[JPT][hapmap]
rs2922818	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.86[YRI][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2922819	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2922820	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2922821	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2922822	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2922823	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2922824	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2979647	0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2979648	0.92[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2979649	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2979650	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2979651	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2979652	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2979653	0.86[EUR][1000 genomes]
rs3020270	0.89[CHD][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs3020275	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3020278	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3020281	0.94[CEU][hapmap];0.86[EUR][1000 genomes]
rs3816402	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56073811	0.90[ASN][1000 genomes]
rs59635757	0.83[ASN][1000 genomes]
rs60915478	0.88[ASN][1000 genomes]
rs6559160	0.91[GIH][hapmap]
rs6559161	0.89[JPT][hapmap]
rs6559162	0.89[JPT][hapmap];0.86[TSI][hapmap];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6559164	0.93[CEU][hapmap];0.94[JPT][hapmap]
rs6989935	0.94[JPT][hapmap]
rs6995735	0.86[GIH][hapmap];0.80[TSI][hapmap]
rs7001036	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7001056	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7002187	0.82[CHD][hapmap];0.94[JPT][hapmap];0.80[ASN][1000 genomes]
rs7002509	0.87[JPT][hapmap]
rs7008037	0.84[GIH][hapmap];0.84[JPT][hapmap]
rs7009134	0.86[GIH][hapmap]
rs73196802	0.85[ASN][1000 genomes]
rs73661775	0.82[ASN][1000 genomes]
rs7824209	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[TSI][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7833479	0.82[ASN][1000 genomes]
rs7833481	1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs7833484	0.82[ASN][1000 genomes]
rs894895	1.00[JPT][hapmap];0.80[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs930557	0.94[JPT][hapmap];0.82[EUR][1000 genomes]
rs963754	0.84[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890034	chr8:5926632-6427868	Enhancers Strong transcription Active TSS Genic enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv1021175	chr8:5965453-6880364	Enhancers Flanking Active TSS Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
3	nsv1027682	chr8:6018123-6920312	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
4	esv3506199	chr8:6116693-6536592	Weak transcription Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	11 gene(s)	inside rSNPs	diseases
5	esv3506200	chr8:6116693-6536592	Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	11 gene(s)	inside rSNPs	diseases
6	nsv482828	chr8:6182711-6355710	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
7	nsv890055	chr8:6237397-6351252	Weak transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
8	nsv933282	chr8:6261036-6440592	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
9	nsv1015981	chr8:6286575-6578450	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
10	nsv1027313	chr8:6286575-6920312	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
11	nsv890056	chr8:6314486-6343727	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
12	nsv890057	chr8:6317165-6427868	Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
13	nsv1023443	chr8:6319260-6332157	Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2920660	AGPAT5	cis	cerebellum	SCAN

Chromatin state (count:105 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:6265000-6339200	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr8:6287600-6344400	Weak transcription	Small Intestine	intestine
3	chr8:6301000-6338400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
4	chr8:6302800-6339800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr8:6303000-6321000	Weak transcription	Psoas Muscle	Psoas
6	chr8:6303000-6321000	Weak transcription	Hela-S3	cervix
7	chr8:6303000-6322800	Weak transcription	Ovary	ovary
8	chr8:6303000-6322800	Weak transcription	Spleen	Spleen
9	chr8:6303000-6325000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr8:6303000-6325200	Weak transcription	Pancreas	Pancrea
11	chr8:6303000-6338200	Weak transcription	Gastric	stomach
12	chr8:6303000-6338200	Weak transcription	Rectal Smooth Muscle	rectum
13	chr8:6303000-6338400	Weak transcription	Colonic Mucosa	Colon
14	chr8:6303000-6338400	Weak transcription	Right Ventricle	heart
15	chr8:6303000-6339400	Weak transcription	Placenta	Placenta
16	chr8:6303200-6320400	Weak transcription	H9 Cell Line	embryonic stem cell
17	chr8:6303200-6321000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
18	chr8:6303200-6322600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
19	chr8:6303200-6322800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr8:6303200-6339400	Weak transcription	Primary hematopoietic stem cells	blood
21	chr8:6303200-6339400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
22	chr8:6303200-6340000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
23	chr8:6303400-6320600	Weak transcription	Brain Inferior Temporal Lobe	brain
24	chr8:6303400-6320800	Weak transcription	Colon Smooth Muscle	Colon
25	chr8:6303400-6321000	Weak transcription	Brain Anterior Caudate	brain
26	chr8:6303400-6321200	Weak transcription	HUVEC	blood vessel
27	chr8:6303600-6321600	Weak transcription	Brain Germinal Matrix	brain
28	chr8:6303800-6338400	Weak transcription	Primary monocytes fromperipheralblood	blood
29	chr8:6304000-6322600	Weak transcription	Fetal Brain Female	brain
30	chr8:6304000-6338000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
31	chr8:6304400-6360200	Weak transcription	Esophagus	oesophagus
32	chr8:6304600-6321200	Weak transcription	Skeletal Muscle Male	skeletal muscle
33	chr8:6304800-6323000	Weak transcription	Rectal Mucosa Donor 31	rectum
34	chr8:6305200-6320000	Weak transcription	Fetal Muscle Leg	muscle
35	chr8:6305800-6319800	Weak transcription	Primary B cells from cord blood	blood
36	chr8:6305800-6322800	Weak transcription	Rectal Mucosa Donor 29	rectum
37	chr8:6306200-6322800	Weak transcription	Fetal Intestine Large	intestine
38	chr8:6306200-6325400	Weak transcription	K562	blood
39	chr8:6306200-6328200	Weak transcription	Fetal Lung	lung
40	chr8:6306600-6322800	Weak transcription	Monocytes-CD14+_RO01746	blood
41	chr8:6308000-6320000	Weak transcription	Thymus	Thymus
42	chr8:6308000-6320600	Weak transcription	Fetal Thymus	thymus
43	chr8:6308000-6330000	Weak transcription	Primary neutrophils fromperipheralblood	blood
44	chr8:6308000-6338400	Weak transcription	Duodenum Smooth Muscle	Duodenum
45	chr8:6308000-6372600	Weak transcription	HMEC	breast
46	chr8:6308400-6321000	Weak transcription	Fetal Muscle Trunk	muscle
47	chr8:6308600-6320600	Weak transcription	Aorta	Aorta
48	chr8:6312200-6338200	Weak transcription	Liver	Liver
49	chr8:6312400-6320400	Weak transcription	A549	lung
50	chr8:6313200-6323200	Weak transcription	NHLF	lung

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