Variant report

Variant	rs2921338
Chromosome Location	chr11:70681972-70681973
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs2921332	0.89[EUR][1000 genomes]
rs2921333	0.89[EUR][1000 genomes]
rs2921336	0.82[AFR][1000 genomes]
rs2921337	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2921339	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2921340	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2921341	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2921342	0.97[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2921343	0.86[AFR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3017499	0.90[EUR][1000 genomes]
rs3019838	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3019839	0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3019841	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3019842	0.82[AFR][1000 genomes]
rs3019849	0.97[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs930585	0.85[EUR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:70665400-70684400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr11:70670000-70731800	Weak transcription	Gastric	stomach
3	chr11:70673000-70688800	Weak transcription	Pancreas	Pancrea
4	chr11:70674000-70683800	Weak transcription	Fetal Intestine Large	intestine
5	chr11:70677400-70683200	Strong transcription	Fetal Intestine Small	intestine
6	chr11:70678400-70686200	Strong transcription	HepG2	liver
7	chr11:70679000-70682400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
8	chr11:70681200-70682400	Weak transcription	HSMMtube	muscle
9	chr11:70681400-70683800	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr11:70681600-70682200	Weak transcription	Fetal Stomach	stomach
11	chr11:70681800-70683400	Weak transcription	H1 Cell Line	embryonic stem cell
12	chr11:70681800-70701400	Weak transcription	Liver	Liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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