Variant report

Variant rs3010192
Chromosome Location chr1:227803051-227803052
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227770000-227853800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr1:227774800-227805000 Weak transcription Brain Hippocampus Middle brain
3 chr1:227790400-227834800 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:227794400-227804400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr1:227794600-227808600 Weak transcription Left Ventricle heart
6 chr1:227795200-227807000 Weak transcription Fetal Heart heart
7 chr1:227796200-227807200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr1:227796800-227806000 Weak transcription Brain Inferior Temporal Lobe brain
9 chr1:227797400-227803400 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr1:227797600-227804800 ZNF genes & repeats Fetal Stomach stomach
11 chr1:227797800-227804800 Weak transcription Primary T cells fromperipheralblood blood
12 chr1:227797800-227805800 ZNF genes & repeats Primary hematopoietic stem cells blood
13 chr1:227797800-227806400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
14 chr1:227797800-227807200 ZNF genes & repeats Fetal Brain Female brain
15 chr1:227798000-227804200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
16 chr1:227798000-227806400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
17 chr1:227798200-227806800 ZNF genes & repeats Brain Germinal Matrix brain
18 chr1:227798200-227806800 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
19 chr1:227798200-227806800 ZNF genes & repeats Fetal Muscle Leg muscle
20 chr1:227798200-227808000 Weak transcription H9 Cell Line embryonic stem cell
21 chr1:227798600-227803400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:227799000-227804000 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
23 chr1:227799400-227805000 ZNF genes & repeats Lung lung
24 chr1:227800000-227803600 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr1:227800200-227803400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr1:227800200-227803400 Weak transcription Rectal Smooth Muscle rectum
27 chr1:227800200-227805000 Weak transcription Brain Substantia Nigra brain
28 chr1:227800200-227805600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:227800200-227820600 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr1:227800400-227804600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:227800400-227805000 Weak transcription Adipose Nuclei Adipose
32 chr1:227800400-227807000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr1:227800400-227814200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr1:227800600-227803800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr1:227800600-227804800 Weak transcription Gastric stomach
36 chr1:227800800-227803200 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr1:227800800-227805000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr1:227801000-227807200 ZNF genes & repeats Primary T cells from cord blood blood
39 chr1:227801200-227821800 Weak transcription Stomach Smooth Muscle stomach
40 chr1:227801400-227803200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr1:227801400-227803400 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr1:227801400-227804400 Weak transcription Brain Angular Gyrus brain
43 chr1:227801600-227803600 Weak transcription Ovary ovary
44 chr1:227801600-227805200 ZNF genes & repeats Liver Liver
45 chr1:227801600-227805200 Weak transcription Fetal Intestine Large intestine
46 chr1:227801800-227804200 Weak transcription Primary B cells from peripheral blood blood
47 chr1:227802200-227806200 ZNF genes & repeats Dnd41 blood
48 chr1:227802600-227803400 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
49 chr1:227802600-227803800 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
50 chr1:227802600-227804200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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