Variant report

Variant rs301906
Chromosome Location chr5:37105606-37105607
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:37065000-37107600 Weak transcription Rectal Smooth Muscle rectum
2 chr5:37067000-37111400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr5:37080200-37112000 Weak transcription Fetal Heart heart
4 chr5:37082000-37109000 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr5:37082800-37169200 Weak transcription Spleen Spleen
6 chr5:37087000-37107000 Weak transcription Pancreas Pancrea
7 chr5:37087200-37106800 Weak transcription Hela-S3 cervix
8 chr5:37087200-37113600 Weak transcription NH-A brain
9 chr5:37094200-37106400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr5:37097800-37107000 Weak transcription Brain Angular Gyrus brain
11 chr5:37099400-37107600 Weak transcription Gastric stomach
12 chr5:37100000-37106800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr5:37100800-37112000 Weak transcription Brain Cingulate Gyrus brain
14 chr5:37101000-37107200 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr5:37101200-37107600 Weak transcription Right Ventricle heart
16 chr5:37101200-37115000 Weak transcription A549 lung
17 chr5:37101400-37113400 Weak transcription Brain Substantia Nigra brain
18 chr5:37102200-37107600 Weak transcription Primary B cells from peripheral blood blood
19 chr5:37102200-37108000 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr5:37102200-37114400 Weak transcription HMEC breast
21 chr5:37102400-37105800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
22 chr5:37102600-37107600 Weak transcription Psoas Muscle Psoas
23 chr5:37102600-37109400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr5:37102600-37115800 Strong transcription HSMM muscle
25 chr5:37102600-37121600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr5:37102800-37107600 Weak transcription Duodenum Mucosa Duodenum
27 chr5:37102800-37110800 Weak transcription Primary T cells fromperipheralblood blood
28 chr5:37102800-37111600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr5:37102800-37112200 Weak transcription HUVEC blood vessel
30 chr5:37102800-37114200 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr5:37103000-37106800 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr5:37103000-37107400 Weak transcription Brain Anterior Caudate brain
33 chr5:37103000-37108600 Strong transcription Muscle Satellite Cultured Cells --
34 chr5:37103000-37109200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr5:37103000-37109400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr5:37103000-37110000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr5:37103000-37110000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr5:37103000-37113200 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr5:37103200-37110000 Strong transcription Adipose Nuclei Adipose
40 chr5:37103400-37108400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr5:37103400-37108800 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr5:37103400-37109000 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr5:37103600-37108400 Weak transcription Colonic Mucosa Colon
44 chr5:37103600-37115800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr5:37103600-37135400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr5:37103800-37109000 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr5:37103800-37109200 Weak transcription Primary T cells from cord blood blood
48 chr5:37103800-37113600 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr5:37103800-37143200 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr5:37104000-37107000 Weak transcription Sigmoid Colon Sigmoid Colon

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