Variant report

Variant rs3087779
Chromosome Location chr9:140084485-140084486
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140081000-140085000 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
2 chr9:140083600-140084600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
3 chr9:140083600-140084600 Flanking Active TSS Stomach Smooth Muscle stomach
4 chr9:140083600-140084600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
5 chr9:140083800-140084600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr9:140083800-140084600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr9:140083800-140084600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
8 chr9:140083800-140084600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
9 chr9:140083800-140084600 Transcr. at gene 5' and 3' Fetal Stomach stomach
10 chr9:140083800-140084600 Flanking Active TSS Stomach Mucosa stomach
11 chr9:140083800-140084600 Flanking Active TSS NH-A brain
12 chr9:140083800-140084800 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
13 chr9:140083800-140084800 Flanking Active TSS HSMM muscle
14 chr9:140083800-140085000 Flanking Active TSS Hela-S3 cervix
15 chr9:140084000-140084600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr9:140084000-140084600 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr9:140084000-140084600 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr9:140084000-140084600 Transcr. at gene 5' and 3' Cortex derived primary cultured neurospheres brain
19 chr9:140084000-140084600 Transcr. at gene 5' and 3' Fetal Brain Female brain
20 chr9:140084000-140084600 Flanking Active TSS HepG2 liver
21 chr9:140084000-140084600 Flanking Active TSS NHDF-Ad bronchial
22 chr9:140084000-140084800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
23 chr9:140084000-140084800 Transcr. at gene 5' and 3' Brain Inferior Temporal Lobe brain
24 chr9:140084000-140084800 Transcr. at gene 5' and 3' A549 lung
25 chr9:140084000-140084800 Transcr. at gene 5' and 3' Dnd41 blood
26 chr9:140084000-140084800 Flanking Active TSS GM12878-XiMat blood
27 chr9:140084000-140084800 Flanking Active TSS HSMMtube muscle
28 chr9:140084000-140085200 Weak transcription Aorta Aorta
29 chr9:140084200-140084600 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr9:140084200-140084600 Genic enhancers HUES6 Cell Line embryonic stem cell
31 chr9:140084200-140084600 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr9:140084200-140084600 Genic enhancers Primary T cells effector/memory enriched fromperipheralblood blood
33 chr9:140084200-140084600 Transcr. at gene 5' and 3' Brain Angular Gyrus brain
34 chr9:140084200-140084600 Enhancers Fetal Kidney kidney
35 chr9:140084200-140084600 Transcr. at gene 5' and 3' Fetal Muscle Trunk muscle
36 chr9:140084200-140084600 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
37 chr9:140084200-140084800 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr9:140084200-140084800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
39 chr9:140084200-140084800 Enhancers Primary T helper naive cells from peripheral blood blood
40 chr9:140084200-140084800 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
41 chr9:140084200-140084800 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
42 chr9:140084200-140084800 Enhancers Primary T killer memory cells from peripheral blood blood
43 chr9:140084200-140084800 Transcr. at gene 5' and 3' Brain Anterior Caudate brain
44 chr9:140084200-140084800 Transcr. at gene 5' and 3' Colonic Mucosa Colon
45 chr9:140084200-140084800 Enhancers Fetal Brain Male brain
46 chr9:140084200-140084800 Transcr. at gene 5' and 3' Fetal Intestine Large intestine
47 chr9:140084200-140084800 Genic enhancers Fetal Thymus thymus
48 chr9:140084200-140084800 Enhancers Psoas Muscle Psoas
49 chr9:140084200-140084800 Enhancers Right Atrium heart
50 chr9:140084200-140085000 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell

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