The 2.0 version of rSNPBase

Variant report

Variant rs309285
Chromosome Location chr2:7193856-7193857
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:7167400-7200400 Weak transcription Rectal Smooth Muscle rectum
2 chr2:7172200-7197200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr2:7174800-7195200 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr2:7178400-7197600 Weak transcription Fetal Heart heart
5 chr2:7182000-7194000 Weak transcription Ovary ovary
6 chr2:7182000-7196000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr2:7182000-7198000 Weak transcription Right Ventricle heart
8 chr2:7182200-7194600 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr2:7182400-7194000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr2:7182600-7195000 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr2:7183000-7194000 Weak transcription Brain Cingulate Gyrus brain
12 chr2:7184600-7194000 Weak transcription Colon Smooth Muscle Colon
13 chr2:7184800-7194200 Weak transcription Fetal Brain Male brain
14 chr2:7184800-7194800 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr2:7186000-7194000 Weak transcription Fetal Brain Female brain
16 chr2:7186200-7194000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr2:7186400-7194000 Weak transcription Brain Substantia Nigra brain
18 chr2:7186600-7194000 Weak transcription Brain Inferior Temporal Lobe brain
19 chr2:7186600-7197600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr2:7188200-7194800 Weak transcription Thymus Thymus
21 chr2:7188800-7200800 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr2:7189200-7195800 Weak transcription Primary hematopoietic stem cells blood
23 chr2:7189400-7194000 Weak transcription Lung lung
24 chr2:7189400-7195000 Weak transcription Primary T cells from cord blood blood
25 chr2:7189400-7203200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr2:7189400-7213800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr2:7191400-7200400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr2:7191600-7195400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr2:7192800-7194000 Enhancers Primary B cells from cord blood blood
30 chr2:7193600-7194800 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr2:7193600-7194800 Enhancers Fetal Stomach stomach
32 chr2:7193800-7194000 Enhancers Brain Hippocampus Middle brain
33 chr2:7193800-7194000 Enhancers Spleen Spleen
34 chr2:7193800-7194200 Enhancers Pancreas Pancrea
35 chr2:7193800-7194400 Enhancers Brain Anterior Caudate brain
36 chr2:7193800-7194600 Enhancers Fetal Kidney kidney
37 chr2:7193800-7194800 Enhancers Skeletal Muscle Male skeletal muscle
38 chr2:7193800-7194800 Strong transcription Dnd41 blood
39 chr2:7193800-7195000 Enhancers Fetal Muscle Leg muscle

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Last update: Aug 31, 2015