Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10454346	0.81[EUR][1000 genomes]
rs10454352	0.88[EUR][1000 genomes]
rs10464832	0.86[EUR][1000 genomes]
rs10808664	0.85[EUR][1000 genomes]
rs10956893	0.86[EUR][1000 genomes]
rs11774322	0.85[EUR][1000 genomes]
rs11784805	0.88[EUR][1000 genomes]
rs11787272	0.87[EUR][1000 genomes]
rs3115942	0.88[EUR][1000 genomes]
rs3115943	0.87[EUR][1000 genomes]
rs3115947	0.88[EUR][1000 genomes]
rs3134014	0.86[EUR][1000 genomes]
rs3134015	0.88[EUR][1000 genomes]
rs3134018	0.88[EUR][1000 genomes]
rs3134019	0.81[EUR][1000 genomes]
rs4236822	0.87[EUR][1000 genomes]
rs4236823	0.87[EUR][1000 genomes]
rs4397372	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59369332	0.88[EUR][1000 genomes]
rs62523012	0.81[EUR][1000 genomes]
rs62523013	0.87[EUR][1000 genomes]
rs6471417	0.88[EUR][1000 genomes]
rs7817292	0.87[EUR][1000 genomes]
rs7835189	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754970	chr8:94675324-94991724	Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	48 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:94980800-94981400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
2	chr8:94980800-94982200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
3	chr8:94980800-94982200	Enhancers	Primary T helper cells fromperipheralblood	blood
4	chr8:94980800-94982400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
5	chr8:94981000-94981600	Enhancers	Primary T helper cells PMA-I stimulated	--
6	chr8:94981000-94981600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
7	chr8:94981000-94982000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
8	chr8:94981000-94982200	Enhancers	Primary T cells fromperipheralblood	blood
9	chr8:94981000-94982200	Enhancers	Primary T killer memory cells from peripheral blood	blood

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