The 2.0 version of rSNPBase

Variant report

Variant rs315532
Chromosome Location chr1:84805309-84805310
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:15 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84795800-84827000 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr1:84801400-84815000 Weak transcription Brain Substantia Nigra brain
3 chr1:84802800-84815600 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr1:84803400-84810000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr1:84804600-84805800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:84804600-84806000 Enhancers Osteobl bone
7 chr1:84805000-84805400 Enhancers NHEK skin
8 chr1:84805000-84805600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:84805000-84806000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr1:84805200-84805400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr1:84805200-84805400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr1:84805200-84805400 Enhancers Psoas Muscle Psoas
13 chr1:84805200-84805600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
14 chr1:84805200-84805600 Enhancers HMEC breast
15 chr1:84805200-84807600 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015