Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1031649	1.00[ASN][1000 genomes]
rs10956948	0.82[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs1219096	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12675140	0.85[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs13252425	0.97[ASN][1000 genomes]
rs1372170	0.82[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs1379739	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1458119	0.90[EUR][1000 genomes]
rs1458134	0.86[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs1545221	0.99[ASN][1000 genomes]
rs2919754	0.81[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs2957792	0.96[ASN][1000 genomes]
rs315963	0.96[ASN][1000 genomes]
rs315964	0.94[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs315965	0.94[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs315973	0.98[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs315976	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs315977	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4961211	0.85[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs7002468	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7002965	0.86[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs7003307	0.86[EUR][1000 genomes]
rs7012836	0.87[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs7014125	0.96[ASN][1000 genomes]
rs7814749	0.97[ASN][1000 genomes]
rs971146	0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023510	chr8:87429001-87874948	Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv891151	chr8:87690019-87776019	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv1026794	chr8:87698639-87957840	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv539662	chr8:87698639-87957840	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:87726600-87727600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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