The 2.0 version of rSNPBase

Variant report

Variant rs3179664
Chromosome Location chr15:55496853-55496854
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:55489600-55497600 Weak transcription Gastric stomach
2 chr15:55489600-55504000 Weak transcription Spleen Spleen
3 chr15:55489600-55513200 Weak transcription Lung lung
4 chr15:55489800-55499400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr15:55489800-55503400 Weak transcription Pancreas Pancrea
6 chr15:55489800-55540200 Weak transcription Esophagus oesophagus
7 chr15:55490000-55497400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr15:55490000-55497400 Weak transcription Adipose Nuclei Adipose
9 chr15:55490000-55497600 Weak transcription Fetal Stomach stomach
10 chr15:55490000-55501600 Weak transcription Left Ventricle heart
11 chr15:55490000-55502000 Weak transcription Colonic Mucosa Colon
12 chr15:55490000-55509600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr15:55490000-55510000 Weak transcription NHLF lung
14 chr15:55490000-55513000 Weak transcription Fetal Intestine Large intestine
15 chr15:55490000-55513200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr15:55490000-55513200 Weak transcription Placenta Amnion Placenta Amnion
17 chr15:55490000-55513200 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr15:55490000-55517200 Weak transcription Aorta Aorta
19 chr15:55490000-55529400 Weak transcription Rectal Smooth Muscle rectum
20 chr15:55490000-55562800 Weak transcription Ovary ovary
21 chr15:55490200-55497000 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr15:55490200-55497000 Weak transcription Primary B cells from peripheral blood blood
23 chr15:55490200-55497000 Weak transcription Primary hematopoietic stem cells blood
24 chr15:55490200-55497200 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr15:55490200-55497200 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr15:55490200-55499400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr15:55490200-55510000 Weak transcription Fetal Kidney kidney
28 chr15:55490200-55510200 Weak transcription Fetal Lung lung
29 chr15:55490200-55511400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr15:55490200-55511400 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr15:55490200-55511400 Weak transcription Osteobl bone
32 chr15:55490200-55513200 Weak transcription Duodenum Mucosa Duodenum
33 chr15:55490200-55513800 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr15:55490200-55514000 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr15:55490400-55497200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr15:55490400-55497600 Weak transcription Primary T cells from cord blood blood
37 chr15:55490400-55500000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr15:55490400-55510000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr15:55490400-55512600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr15:55490600-55497400 Weak transcription Hela-S3 cervix
41 chr15:55490600-55500200 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr15:55490600-55510200 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr15:55490800-55504200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr15:55491000-55500000 Weak transcription Dnd41 blood
45 chr15:55491000-55513600 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr15:55493800-55499800 Strong transcription Monocytes-CD14+_RO01746 blood
47 chr15:55493800-55501000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr15:55494000-55502000 Strong transcription Primary neutrophils fromperipheralblood blood
49 chr15:55494400-55498400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
50 chr15:55494800-55497000 Weak transcription Stomach Mucosa stomach

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Last update: Aug 31, 2015