The 2.0 version of rSNPBase

Variant report

Variant rs28508034
Chromosome Location chr15:55499010-55499011
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:55489600-55504000 Weak transcription Spleen Spleen
2 chr15:55489600-55513200 Weak transcription Lung lung
3 chr15:55489800-55499400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr15:55489800-55503400 Weak transcription Pancreas Pancrea
5 chr15:55489800-55540200 Weak transcription Esophagus oesophagus
6 chr15:55490000-55501600 Weak transcription Left Ventricle heart
7 chr15:55490000-55502000 Weak transcription Colonic Mucosa Colon
8 chr15:55490000-55509600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr15:55490000-55510000 Weak transcription NHLF lung
10 chr15:55490000-55513000 Weak transcription Fetal Intestine Large intestine
11 chr15:55490000-55513200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr15:55490000-55513200 Weak transcription Placenta Amnion Placenta Amnion
13 chr15:55490000-55513200 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr15:55490000-55517200 Weak transcription Aorta Aorta
15 chr15:55490000-55529400 Weak transcription Rectal Smooth Muscle rectum
16 chr15:55490000-55562800 Weak transcription Ovary ovary
17 chr15:55490200-55499400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr15:55490200-55510000 Weak transcription Fetal Kidney kidney
19 chr15:55490200-55510200 Weak transcription Fetal Lung lung
20 chr15:55490200-55511400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr15:55490200-55511400 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr15:55490200-55511400 Weak transcription Osteobl bone
23 chr15:55490200-55513200 Weak transcription Duodenum Mucosa Duodenum
24 chr15:55490200-55513800 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr15:55490200-55514000 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr15:55490400-55500000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr15:55490400-55510000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr15:55490400-55512600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr15:55490600-55500200 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr15:55490600-55510200 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr15:55490800-55504200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr15:55491000-55500000 Weak transcription Dnd41 blood
33 chr15:55491000-55513600 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr15:55493800-55499800 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr15:55493800-55501000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr15:55494000-55502000 Strong transcription Primary neutrophils fromperipheralblood blood
37 chr15:55495000-55501800 Strong transcription Primary monocytes fromperipheralblood blood
38 chr15:55495200-55499200 Weak transcription Fetal Heart heart
39 chr15:55497800-55500000 Weak transcription Placenta Placenta
40 chr15:55497800-55510000 Weak transcription Primary B cells from cord blood blood
41 chr15:55497800-55511200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr15:55497800-55513000 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr15:55497800-55513000 Weak transcription Hela-S3 cervix
44 chr15:55497800-55514000 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr15:55497800-55518400 Weak transcription Gastric stomach
46 chr15:55498000-55499200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr15:55498000-55499400 Weak transcription Adipose Nuclei Adipose
48 chr15:55498000-55499400 Weak transcription K562 blood
49 chr15:55498000-55500200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr15:55498000-55505000 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015