The 2.0 version of rSNPBase

Variant report

Variant rs4238316
Chromosome Location chr15:55470187-55470188
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:55455800-55487200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr15:55462600-55470200 Weak transcription Fetal Lung lung
3 chr15:55462600-55471600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr15:55462600-55488600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr15:55463200-55470400 Weak transcription A549 lung
6 chr15:55463200-55472400 Weak transcription Ovary ovary
7 chr15:55463200-55474600 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr15:55463400-55472200 Weak transcription H9 Cell Line embryonic stem cell
9 chr15:55463800-55472600 Weak transcription Fetal Kidney kidney
10 chr15:55464000-55470800 Weak transcription Brain Germinal Matrix brain
11 chr15:55464400-55470600 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr15:55464600-55472400 Weak transcription Brain Hippocampus Middle brain
13 chr15:55464800-55488200 Weak transcription Lung lung
14 chr15:55465200-55470400 Weak transcription Primary B cells from peripheral blood blood
15 chr15:55465200-55470800 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr15:55465400-55470400 Weak transcription Dnd41 blood
17 chr15:55465400-55470800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr15:55465400-55471000 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr15:55465400-55471200 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr15:55465400-55471400 Weak transcription Brain Angular Gyrus brain
21 chr15:55465400-55472600 Weak transcription Stomach Smooth Muscle stomach
22 chr15:55465400-55476600 Weak transcription Brain Anterior Caudate brain
23 chr15:55465600-55470200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr15:55465600-55470400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr15:55465600-55470400 Weak transcription Left Ventricle heart
26 chr15:55465800-55470200 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr15:55465800-55471600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr15:55466200-55470800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr15:55466600-55470400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr15:55466600-55470400 Weak transcription GM12878-XiMat blood
31 chr15:55466600-55470800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr15:55466600-55471400 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr15:55466600-55472000 Weak transcription Placenta Placenta
34 chr15:55466800-55470400 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr15:55466800-55471000 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr15:55466800-55474000 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr15:55466800-55474600 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr15:55466800-55486800 Weak transcription Psoas Muscle Psoas
39 chr15:55467600-55471000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr15:55467600-55472400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr15:55467800-55480600 Weak transcription Fetal Stomach stomach
42 chr15:55468000-55470200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr15:55468000-55470400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr15:55468000-55482000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr15:55468200-55470400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr15:55468200-55471000 Weak transcription Osteobl bone
47 chr15:55468200-55481600 Weak transcription Fetal Intestine Small intestine
48 chr15:55468400-55471000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr15:55468400-55471000 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr15:55468400-55471400 Weak transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015