Variant report

Variant rs3218806
Chromosome Location chr6:30875664-30875665
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30858400-30876000 Weak transcription Fetal Heart heart
2 chr6:30866600-30876000 Weak transcription Small Intestine intestine
3 chr6:30867800-30876000 Weak transcription Placenta Amnion Placenta Amnion
4 chr6:30875000-30876600 Active TSS GM12878-XiMat blood
5 chr6:30875000-30877000 Active TSS ES-I3 Cell Line embryonic stem cell
6 chr6:30875200-30875800 Flanking Active TSS Dnd41 blood
7 chr6:30875200-30876200 Active TSS Primary T cells from cord blood blood
8 chr6:30875200-30876200 Active TSS Primary T helper naive cells from peripheral blood blood
9 chr6:30875200-30876200 Active TSS Primary T regulatory cells fromperipheralblood blood
10 chr6:30875200-30876200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
11 chr6:30875200-30876200 Active TSS Liver Liver
12 chr6:30875200-30876200 Active TSS Duodenum Mucosa Duodenum
13 chr6:30875200-30876200 Active TSS Placenta Placenta
14 chr6:30875200-30876200 Active TSS Thymus Thymus
15 chr6:30875200-30876400 Active TSS H1 Cell Line embryonic stem cell
16 chr6:30875200-30876400 Active TSS iPS-15b Cell Line embryonic stem cell
17 chr6:30875200-30876400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr6:30875200-30876400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr6:30875200-30876400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
20 chr6:30875200-30876400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr6:30875200-30876400 Active TSS Brain Inferior Temporal Lobe brain
22 chr6:30875200-30876400 Active TSS Duodenum Smooth Muscle Duodenum
23 chr6:30875200-30876400 Active TSS Fetal Intestine Large intestine
24 chr6:30875200-30876400 Active TSS Fetal Intestine Small intestine
25 chr6:30875200-30876400 Active TSS Pancreatic Islets Pancreatic Islet
26 chr6:30875200-30876400 Active TSS Rectal Smooth Muscle rectum
27 chr6:30875200-30876600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr6:30875200-30876600 Active TSS iPS-20b Cell Line embryonic stem cell
29 chr6:30875200-30876600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr6:30875200-30876600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
31 chr6:30875200-30876600 Active TSS Pancreas Pancrea
32 chr6:30875200-30876600 Active TSS A549 lung
33 chr6:30875200-30877000 Active TSS HUES6 Cell Line embryonic stem cell
34 chr6:30875200-30877000 Active TSS HUES64 Cell Line embryonic stem cell
35 chr6:30875200-30877200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr6:30875200-30877200 Active TSS HUES48 Cell Line embryonic stem cell
37 chr6:30875400-30875800 Flanking Active TSS Primary monocytes fromperipheralblood blood
38 chr6:30875400-30875800 Flanking Active TSS Primary B cells from peripheral blood blood
39 chr6:30875400-30875800 Flanking Active TSS Primary T cells fromperipheralblood blood
40 chr6:30875400-30875800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
41 chr6:30875400-30875800 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
42 chr6:30875400-30875800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr6:30875400-30875800 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
44 chr6:30875400-30875800 Flanking Active TSS Fetal Muscle Trunk muscle
45 chr6:30875400-30875800 Flanking Active TSS Fetal Thymus thymus
46 chr6:30875400-30875800 Transcr. at gene 5' and 3' Right Atrium heart
47 chr6:30875400-30876000 Active TSS Primary T helper 17 cells PMA-I stimulated --
48 chr6:30875400-30876000 Active TSS HepG2 liver
49 chr6:30875400-30876200 Active TSS Primary T helper cells PMA-I stimulated --
50 chr6:30875400-30876400 Active TSS ES-WA7 Cell Line embryonic stem cell

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